| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 17545154
GI number: 17545154
Start: 463514
End: 464230
Strand: Direct
Name: fabG [H]
Synonym: RSc0435
Alternate gene names: 17545154
Gene position: 463514-464230 (Clockwise)
Preceding gene: 17545153
Following gene: 17545155
Centisome position: 12.47
GC content: 70.15
Gene sequence:
>717_bases ATGCGTGCGCTCGTAACCGGGGGCAGCGGTGCAATCGGGCAGGCCGTCAGCGAGGCGCTGGCAAGGGCCGGGCACGAAGT CTGGGTGCATGCGAACCGCAATCTGGAGCAGGCTGAAGCCGTCGCGCAGCGGATCGTCGCGGCCGGCGGCACCGCGCATG CCATCGCATTCGACGTGACCGACGCGCAGGCCACCGAGGCCGCCCTGGCGCCCGTGCTCGACGGCGCGCCCGTGCAGATT CTCGTCAACAACGCCGGCGTCCACGACGATGCGCCGATGGCCGGCATGACGCAGCAGCAATGGCGCCGCGTCATCGACGT CTCGCTCAATGGCTTCTTCAATGTCACGCAGCCGCTGCTGATGCCGATGATCCGCACCCGCTGGGGGCGCATCATCAACA TGGCCTCGGTGGCCGGCGTGATGGGCAATCGCGGGCAGGCCAACTATGCGGCGGCCAAGGCCGGCCTGATCGGCGCGACC AAATCGCTGGCGCAGGAGCTGGCCTCGCGCGGCATCACCGTGAATGCGGTGGCGCCCGGCATCATCGCTTCGCCGATGGC CGGGGAGGCGTTTCCGGCCGAGCGCATCAAGCAGCTGGTGCCGGCCGGGCGCGCGGGCCAGCCCGACGAGGTCGCGGGCA TGGTGGCGTACCTGGCATCGGATGCGGCCGCCTATGTCACGGGGCAGGTCCTCTCGATCAACGGCGGACTGGCCTGA
Upstream 100 bases:
>100_bases ATCCGGCGCGCTGCGGCGGCACCGCCCGGACACGGGGCGGCCGGCCCCGCGCATGGCCGATCACATCGGAAGTGGACCAA CCAAAGGGAGTGGAGAAGCG
Downstream 100 bases:
>100_bases GCCTCGCGGCGCACGCCGGCCAGCCCTTCTCCGGTTTTTCTCCCATTGGCTGTTTCCATGTCCACGACCCGCGCTTCGGC GACGCACCTGGTGCTGATCC
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MRALVTGGSGAIGQAVSEALARAGHEVWVHANRNLEQAEAVAQRIVAAGGTAHAIAFDVTDAQATEAALAPVLDGAPVQI LVNNAGVHDDAPMAGMTQQQWRRVIDVSLNGFFNVTQPLLMPMIRTRWGRIINMASVAGVMGNRGQANYAAAKAGLIGAT KSLAQELASRGITVNAVAPGIIASPMAGEAFPAERIKQLVPAGRAGQPDEVAGMVAYLASDAAAYVTGQVLSINGGLA
Sequences:
>Translated_238_residues MRALVTGGSGAIGQAVSEALARAGHEVWVHANRNLEQAEAVAQRIVAAGGTAHAIAFDVTDAQATEAALAPVLDGAPVQI LVNNAGVHDDAPMAGMTQQQWRRVIDVSLNGFFNVTQPLLMPMIRTRWGRIINMASVAGVMGNRGQANYAAAKAGLIGAT KSLAQELASRGITVNAVAPGIIASPMAGEAFPAERIKQLVPAGRAGQPDEVAGMVAYLASDAAAYVTGQVLSINGGLA >Mature_238_residues MRALVTGGSGAIGQAVSEALARAGHEVWVHANRNLEQAEAVAQRIVAAGGTAHAIAFDVTDAQATEAALAPVLDGAPVQI LVNNAGVHDDAPMAGMTQQQWRRVIDVSLNGFFNVTQPLLMPMIRTRWGRIINMASVAGVMGNRGQANYAAAKAGLIGAT KSLAQELASRGITVNAVAPGIIASPMAGEAFPAERIKQLVPAGRAGQPDEVAGMVAYLASDAAAYVTGQVLSINGGLA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=38, Blast_Score=141, Evalue=5e-34, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=36.864406779661, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=32.520325203252, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=31.3008130081301, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=31.7460317460317, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI4504505, Length=229, Percent_Identity=31.4410480349345, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=30.3643724696356, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI4503301, Length=218, Percent_Identity=29.3577981651376, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI66933014, Length=212, Percent_Identity=29.2452830188679, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=28.6307053941909, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI126723750, Length=243, Percent_Identity=29.2181069958848, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI59889578, Length=168, Percent_Identity=32.7380952380952, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4758504, Length=253, Percent_Identity=30.8300395256917, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI31542939, Length=224, Percent_Identity=30.8035714285714, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI7706318, Length=200, Percent_Identity=29, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=28.2828282828283, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=31.2820512820513, Blast_Score=71, Evalue=9e-13, Organism=Escherichia coli, GI1787335, Length=238, Percent_Identity=44.9579831932773, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=35.3909465020576, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=31.6666666666667, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87082100, Length=247, Percent_Identity=34.0080971659919, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=33.0543933054393, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI87082160, Length=241, Percent_Identity=31.5352697095436, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789208, Length=244, Percent_Identity=31.9672131147541, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=32.4110671936759, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787905, Length=238, Percent_Identity=31.5126050420168, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=31.7269076305221, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI2367365, Length=242, Percent_Identity=32.2314049586777, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=28.1632653061224, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787526, Length=243, Percent_Identity=28.3950617283951, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1787820, Length=199, Percent_Identity=27.1356783919598, Blast_Score=64, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=40.9090909090909, Blast_Score=165, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=40.4858299595142, Blast_Score=152, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=33.8775510204082, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17536025, Length=248, Percent_Identity=32.6612903225806, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17560150, Length=253, Percent_Identity=30.0395256916996, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17568967, Length=229, Percent_Identity=32.3144104803493, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=31.404958677686, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=32.6693227091633, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17559104, Length=255, Percent_Identity=29.8039215686275, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=30.859375, Blast_Score=93, Evalue=9e-20, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=29.0322580645161, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17538480, Length=257, Percent_Identity=29.9610894941634, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=33.7209302325581, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562910, Length=257, Percent_Identity=28.0155642023346, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562990, Length=252, Percent_Identity=28.1746031746032, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=27.4193548387097, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=28.6821705426357, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=31.3725490196078, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17538486, Length=256, Percent_Identity=28.515625, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17562908, Length=256, Percent_Identity=29.296875, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561272, Length=234, Percent_Identity=29.9145299145299, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17531453, Length=258, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=25.1968503937008, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17563726, Length=254, Percent_Identity=27.1653543307087, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17508651, Length=251, Percent_Identity=28.2868525896414, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565030, Length=257, Percent_Identity=29.5719844357977, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17551412, Length=258, Percent_Identity=27.906976744186, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17564282, Length=191, Percent_Identity=26.7015706806283, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17560220, Length=256, Percent_Identity=29.296875, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17508895, Length=206, Percent_Identity=25.7281553398058, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17544670, Length=258, Percent_Identity=26.3565891472868, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=242, Percent_Identity=32.2314049586777, Blast_Score=118, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6324126, Length=245, Percent_Identity=28.1632653061224, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323882, Length=230, Percent_Identity=27.8260869565217, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=38.5245901639344, Blast_Score=144, Evalue=3e-35, Organism=Drosophila melanogaster, GI21357041, Length=243, Percent_Identity=32.5102880658436, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI28571526, Length=243, Percent_Identity=32.5102880658436, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=35.5371900826446, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI23397609, Length=243, Percent_Identity=32.0987654320988, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI18859837, Length=230, Percent_Identity=34.3478260869565, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24644339, Length=243, Percent_Identity=29.6296296296296, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=27.1255060728745, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=30.4347826086957, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI24644337, Length=215, Percent_Identity=28.8372093023256, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24640442, Length=191, Percent_Identity=29.8429319371728, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24584748, Length=186, Percent_Identity=29.5698924731183, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI161076933, Length=186, Percent_Identity=29.5698924731183, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR011285 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24338; Mature: 24338
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVTGGSGAIGQAVSEALARAGHEVWVHANRNLEQAEAVAQRIVAAGGTAHAIAFDVT CCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECC DAQATEAALAPVLDGAPVQILVNNAGVHDDAPMAGMTQQQWRRVIDVSLNGFFNVTQPLL CCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH MPMIRTRWGRIINMASVAGVMGNRGQANYAAAKAGLIGATKSLAQELASRGITVNAVAPG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC IIASPMAGEAFPAERIKQLVPAGRAGQPDEVAGMVAYLASDAAAYVTGQVLSINGGLA HHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHCCEEEEECCCCC >Mature Secondary Structure MRALVTGGSGAIGQAVSEALARAGHEVWVHANRNLEQAEAVAQRIVAAGGTAHAIAFDVT CCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECC DAQATEAALAPVLDGAPVQILVNNAGVHDDAPMAGMTQQQWRRVIDVSLNGFFNVTQPLL CCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH MPMIRTRWGRIINMASVAGVMGNRGQANYAAAKAGLIGATKSLAQELASRGITVNAVAPG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC IIASPMAGEAFPAERIKQLVPAGRAGQPDEVAGMVAYLASDAAAYVTGQVLSINGGLA HHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]