| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yhbN [C]
Identifier: 17545129
GI number: 17545129
Start: 437978
End: 438553
Strand: Reverse
Name: yhbN [C]
Synonym: RSc0410
Alternate gene names: 17545129
Gene position: 438553-437978 (Counterclockwise)
Preceding gene: 17545130
Following gene: 17545128
Centisome position: 11.8
GC content: 70.14
Gene sequence:
>576_bases ATGACCGACACCCGCCGCGCCAGCGGCCTTGCCCTCCTCGCCCTGAGCGCCGCGCTGTTGCTGCCGGCCCTGCCCGCGCA CGCCGAGCGCGCCGACCGCGACAAGCCGCTGGTGCTCGAAGCCGACAACGCCAGCTACGACGACCTGAAGCAGGTCTATC ACCTGTCCGGCAACGTGGTGCTGACCAAGGGCACCATGGTGCTGCGCTCCGACACCGCCGATCTGCGCACGGACCCGGAG GGCTACAACTACGCCGTCGCCATCGCCAAGCCCGGCAACCTGGCCTTCATCCGCCAGAAGCGCGACAACGTCGATGAGTA CATCCAGGGCTGGGGCGAGCGCATCGAGTACGACGGCAAGCAGGAGATCTCCAAGCTGATCAACCGTGCCCGCATGGAGC GCCTGCAGGGCGCCACGCAGCTCGACGAGATCCGCGGCGCGGTCATCACCTACGACGGCCAGAAGGAGTTCTACACGGCC TCGGGCGGCGCGGAGAACGCAACCGCCGCCAACCCGTCCGGCCGCGTGCGTGCCGTGCTCGCGCCGCGCAGCGGGACGCC GGCCGCCAAGCCCTGA
Upstream 100 bases:
>100_bases GCATCGAAGGGCTGGGCGCGCCGAAGCAGTAAACTGCGCCCTCGGCAACGTTCCGGCCCCGACGCTCCCGATCCACCGCG CCTTCTCCGATCCGATTTCC
Downstream 100 bases:
>100_bases TCCGTCCCGCCGACCCGCTTTTCCGCTTCGCCTATGTCCGCCACTGCCCAAGCCACCGCCACCATCGCGCCGCAAGCCGC CACCTCCAGCACGCTGGTGG
Product: signal peptide protein
Products: NA
Alternate protein names: OstA-Like Protein; OstA Family Protein; OstA-Like Family Protein; Signal Peptide Protein; Lipopolysaccharide Transport Periplasmic Protein Lpta; Cell Envelope Biogenesis Protein YhbN; Protein YhbN; Exported Protein
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTDTRRASGLALLALSAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLSGNVVLTKGTMVLRSDTADLRTDPE GYNYAVAIAKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEISKLINRARMERLQGATQLDEIRGAVITYDGQKEFYTA SGGAENATAANPSGRVRAVLAPRSGTPAAKP
Sequences:
>Translated_191_residues MTDTRRASGLALLALSAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLSGNVVLTKGTMVLRSDTADLRTDPE GYNYAVAIAKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEISKLINRARMERLQGATQLDEIRGAVITYDGQKEFYTA SGGAENATAANPSGRVRAVLAPRSGTPAAKP >Mature_190_residues TDTRRASGLALLALSAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLSGNVVLTKGTMVLRSDTADLRTDPEG YNYAVAIAKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEISKLINRARMERLQGATQLDEIRGAVITYDGQKEFYTAS GGAENATAANPSGRVRAVLAPRSGTPAAKP
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20742; Mature: 20610
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTRRASGLALLALSAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLSGNVV CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEE LTKGTMVLRSDTADLRTDPEGYNYAVAIAKPGNLAFIRQKRDNVDEYIQGWGERIEYDGK EEECEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCH QEISKLINRARMERLQGATQLDEIRGAVITYDGQKEFYTASGGAENATAANPSGRVRAVL HHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEE APRSGTPAAKP ECCCCCCCCCC >Mature Secondary Structure TDTRRASGLALLALSAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLSGNVV CCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEE LTKGTMVLRSDTADLRTDPEGYNYAVAIAKPGNLAFIRQKRDNVDEYIQGWGERIEYDGK EEECEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCH QEISKLINRARMERLQGATQLDEIRGAVITYDGQKEFYTASGGAENATAANPSGRVRAVL HHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEE APRSGTPAAKP ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA