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The map label for this gene is yhbH [C]

Identifier: 17545126

GI number: 17545126

Start: 435154

End: 435507

Strand: Reverse

Name: yhbH [C]

Synonym: RSc0407

Alternate gene names: 17545126

Gene position: 435507-435154 (Counterclockwise)

Preceding gene: 17545127

Following gene: 17545125

Centisome position: 11.72

GC content: 55.37

Gene sequence:

>354_bases
ATGAACTTCAAACTCAGTGGACACCACCTGGACATCACGCCACCGTTGCGTGAGTACGTGGAAACGAAACTGGAGCGTGT
GATCAGACACTTCGATCAGGTGATTGGCGTCAGCGTGCTGCTATCGGTCGATAACCACAAGGAGAAGAGTCGCCGCCAGT
ACGCGGAAATCAACCTGCATCTCAAGGGTAAGGATGTCTTCGTCGAATCACACCATGAAGATCTCTATGCGGCCATCGAT
CTCCTCGTCGACAAGCTCGACCGGCAGGTCCTCAAATACAAGGACCGCGTACAGGGGCATGATCGCGACGCCCTGAAGCA
TCAGGCCCTCTCCGCCGCGCAGATGCAGCAATAG

Upstream 100 bases:

>100_bases
CCGCGAAGCCCTCAAGATCCCAGCAGTGAATCTGCGCAAGTCTTTATAGCCGCATCGCGGGCAGTTCCGGTGCGGCCCAT
CCGTGAGAAGGAGAACCGCT

Downstream 100 bases:

>100_bases
CACGATGCACCACAAAAAACCGCGCCCCGGGATGGCGCGGTTTTTTTATGTGTTGGTGCGTGCCCAATGAATCCGATTGC
ATCGGATTTCAGTCGGGCTA

Product: sigma-54 modulation protein

Products: NA

Alternate protein names: ORF130 [H]

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNFKLSGHHLDITPPLREYVETKLERVIRHFDQVIGVSVLLSVDNHKEKSRRQYAEINLHLKGKDVFVESHHEDLYAAID
LLVDKLDRQVLKYKDRVQGHDRDALKHQALSAAQMQQ

Sequences:

>Translated_117_residues
MNFKLSGHHLDITPPLREYVETKLERVIRHFDQVIGVSVLLSVDNHKEKSRRQYAEINLHLKGKDVFVESHHEDLYAAID
LLVDKLDRQVLKYKDRVQGHDRDALKHQALSAAQMQQ
>Mature_117_residues
MNFKLSGHHLDITPPLREYVETKLERVIRHFDQVIGVSVLLSVDNHKEKSRRQYAEINLHLKGKDVFVESHHEDLYAAID
LLVDKLDRQVLKYKDRVQGHDRDALKHQALSAAQMQQ

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=100, Percent_Identity=35, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 13676; Mature: 13676

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKLSGHHLDITPPLREYVETKLERVIRHFDQVIGVSVLLSVDNHKEKSRRQYAEINLH
CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHEEEE
LKGKDVFVESHHEDLYAAIDLLVDKLDRQVLKYKDRVQGHDRDALKHQALSAAQMQQ
ECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFKLSGHHLDITPPLREYVETKLERVIRHFDQVIGVSVLLSVDNHKEKSRRQYAEINLH
CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHEEEE
LKGKDVFVESHHEDLYAAIDLLVDKLDRQVLKYKDRVQGHDRDALKHQALSAAQMQQ
ECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1417413 [H]