| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545095
Identifier: 17545095
GI number: 17545095
Start: 405556
End: 405960
Strand: Direct
Name: 17545095
Synonym: RSc0376
Alternate gene names: NA
Gene position: 405556-405960 (Clockwise)
Preceding gene: 17545092
Following gene: 17545096
Centisome position: 10.91
GC content: 65.68
Gene sequence:
>405_bases ATGACCATCGTCGTCACCAAGGACGCGGAAGGACTCTTCCGTCACAAAGTCATCTTTCCCGAAGGCGTGGCCTACACCGA TGTTCCCAAGCCGACCGGCGAGGGCAGCGCGCCCGATCCGCACGCCTATTTCGATGCCGCGCTGGCCTGCTGCAAGACGC TGACCGTGACGCTCTACGCGCGCCAGCGCAAATACCCGCTGGAATCCATCGAGGTGGCGGTCGAGCACGACGGCAGCCAG GAGCGCCAGGGCCACTACAAGCTGCGCACCGTGCTGACGCTGCATGGCGACCTGACCGACGAGCAGCGCGCCGACCTGCT GCGCGTGGCCGGCAAGTGCCCGATCCACAAGCTGATGACCGAGGTCGAGGTCAGCATCGACACCCAATTGGCCGAGCGCG CCTGA
Upstream 100 bases:
>100_bases CTCGATCGGCATTCGCCTCGTATGCCCACGGCCCAGTTCGCTACACTGCCGTGGCGGCGTAGCCGTTGCGCGCCGGATCA TTTTTCTCCCTGGAGCCCGC
Downstream 100 bases:
>100_bases AGGCCCCGACATGACCTCGATCCAGCACATCATCGGGCCGCACGTGCGCGACCTGGGCGGCTTCTCGGTCAAGCGCGTGC TGCCGGCGGCCGCGCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: OsmC-Like Protein; OsmC-Like Family; Osmotically Inducible Protein; Hydrolase; OsmC-Like Protein/ Redox Protein; Hydroperoxide Resistance Protein OsmC-Like Protein; OsmC-Like Protein Superfamily Protein; OsmC-Like Family Protein
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTIVVTKDAEGLFRHKVIFPEGVAYTDVPKPTGEGSAPDPHAYFDAALACCKTLTVTLYARQRKYPLESIEVAVEHDGSQ ERQGHYKLRTVLTLHGDLTDEQRADLLRVAGKCPIHKLMTEVEVSIDTQLAERA
Sequences:
>Translated_134_residues MTIVVTKDAEGLFRHKVIFPEGVAYTDVPKPTGEGSAPDPHAYFDAALACCKTLTVTLYARQRKYPLESIEVAVEHDGSQ ERQGHYKLRTVLTLHGDLTDEQRADLLRVAGKCPIHKLMTEVEVSIDTQLAERA >Mature_133_residues TIVVTKDAEGLFRHKVIFPEGVAYTDVPKPTGEGSAPDPHAYFDAALACCKTLTVTLYARQRKYPLESIEVAVEHDGSQE RQGHYKLRTVLTLHGDLTDEQRADLLRVAGKCPIHKLMTEVEVSIDTQLAERA
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14890; Mature: 14759
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVVTKDAEGLFRHKVIFPEGVAYTDVPKPTGEGSAPDPHAYFDAALACCKTLTVTLYA CEEEEECCCCCHHHEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEE RQRKYPLESIEVAVEHDGSQERQGHYKLRTVLTLHGDLTDEQRADLLRVAGKCPIHKLMT CCCCCCHHHEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHH EVEVSIDTQLAERA HHHHHHHHHHHCCC >Mature Secondary Structure TIVVTKDAEGLFRHKVIFPEGVAYTDVPKPTGEGSAPDPHAYFDAALACCKTLTVTLYA EEEEECCCCCHHHEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEE RQRKYPLESIEVAVEHDGSQERQGHYKLRTVLTLHGDLTDEQRADLLRVAGKCPIHKLMT CCCCCCHHHEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHH EVEVSIDTQLAERA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA