Click here to switch to the map view.

The map label for this gene is 17545034

Identifier: 17545034

GI number: 17545034

Start: 346301

End: 347293

Strand: Direct

Name: 17545034

Synonym: RSc0315

Alternate gene names: NA

Gene position: 346301-347293 (Clockwise)

Preceding gene: 17545033

Following gene: 17545035

Centisome position: 9.32

GC content: 70.8

Gene sequence:

>993_bases
ATGGAAAACCGTGCCCACGCGTTCCTCGCCGGGCTGTTCACGATCGGGCTGGCGATCTTCATCGCGCTGGCGGTGGTGTG
GTTCAACCGCGACCAGACCGTGCGCGTGCCCTACGAGGTGGTGACGCGCTCCACCGTCAACGGGCTGAGCCCGCAGGCGG
CCGTCAAGTACCGCGGGCTGGACGTCGGCAAGGTGGACAGCATCCGCTTTGACGACAGGGTCCCGGGCCAGATCATCGTG
CGGGTGCTGGTCGACAAGGACGCGCCCATCACCACCACCACCTACGGCCGGCTGGCCTACCAGGGCGTGACCGGCCTGGC
CTACGTGCAGCTCGATGACCGAGGCTACGACGGCGGCAAGCGGGCGGCCAACCCGACCCGTCTCGAAACCTCCGACAGGC
GTCCGGCGCGCATCGCCATGGAGGCCGGCTTTCTCGACGAGCTCGACAAGCGCGGCGACCAGATGCTGGCCCGGATCGAC
CAGACGCTGAGCTCGCTCTCCGCGCTGTTCGACGATGAGCACCGGCAGGCGCTGATGGCGGCGATGCAGTCGTTCCAGGG
CACGATGGACAGCTACAACGCGCTCGCCCGCCAGGCCGAGCCGACGATGCGCAGGCTGCCGCAGATCGCCGACAACCTCG
ACGCCACCCTGTCCGCCACGCGCCGGCTGTCGCAATCGCTGTCCGACCCGAAGGGGCCGCTGATGGGGACGCTGGCCAGC
GCCGGCAATGACCTGAGCTCGGCCTCGCAGTCGATGCAGGCGGCCACCAACGTGCTCGCCAACGAGACCCTGCCGCAGCT
CAACGGCTTCGCCCGCGAGGCCCGCCAGGCCGTGCGCAGCTTCGACCATGCGGTGACCGATTTCAACACCCGCCCGCAGA
GCGTGCTGTTCGGCCCCGCGCCCGCCACGCCCGGCCCCGGCGAGACCGGTTTCGCCGCGCCGCAGGTGTCGGCGGCCCCG
TCGGTGGCCGTCCCCGCGACTGCCCGGCCCTGA

Upstream 100 bases:

>100_bases
AATACTTCCTGGGCGAGCGGGGCAAGCGGGCCCTGATGGCGCTGGGCCCCGAGATGACGGAAGCGGTGGCCGCGGCCAGC
CTTTCGATGCAGGAGGACTG

Downstream 100 bases:

>100_bases
GGAGATTCCATGCTGATCCTGCCGACCGTGTTGCGCCGCGCGCTGGTGCTGTCCGCCCTGGCCGCGCTGGCGGCCTGTTC
CAGTACGCCGACCGCGCCCG

Product: signal peptide protein

Products: NA

Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC Transporter Permease; ABC-Type Transporter Periplasmic Component; ABC Membrane Transporter Periplasmic Protein; Mammalian Cell Entry ; Mce Related Family; Mce Family Protein; MCE-Like Family Protein; ABC-Type Transport System Periplasmic Component LinM; Signal Peptide Protein; ABC Transporter; Periplasmic Protein; Exported Protein

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MENRAHAFLAGLFTIGLAIFIALAVVWFNRDQTVRVPYEVVTRSTVNGLSPQAAVKYRGLDVGKVDSIRFDDRVPGQIIV
RVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYDGGKRAANPTRLETSDRRPARIAMEAGFLDELDKRGDQMLARID
QTLSSLSALFDDEHRQALMAAMQSFQGTMDSYNALARQAEPTMRRLPQIADNLDATLSATRRLSQSLSDPKGPLMGTLAS
AGNDLSSASQSMQAATNVLANETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSVLFGPAPATPGPGETGFAAPQVSAAP
SVAVPATARP

Sequences:

>Translated_330_residues
MENRAHAFLAGLFTIGLAIFIALAVVWFNRDQTVRVPYEVVTRSTVNGLSPQAAVKYRGLDVGKVDSIRFDDRVPGQIIV
RVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYDGGKRAANPTRLETSDRRPARIAMEAGFLDELDKRGDQMLARID
QTLSSLSALFDDEHRQALMAAMQSFQGTMDSYNALARQAEPTMRRLPQIADNLDATLSATRRLSQSLSDPKGPLMGTLAS
AGNDLSSASQSMQAATNVLANETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSVLFGPAPATPGPGETGFAAPQVSAAP
SVAVPATARP
>Mature_330_residues
MENRAHAFLAGLFTIGLAIFIALAVVWFNRDQTVRVPYEVVTRSTVNGLSPQAAVKYRGLDVGKVDSIRFDDRVPGQIIV
RVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYDGGKRAANPTRLETSDRRPARIAMEAGFLDELDKRGDQMLARID
QTLSSLSALFDDEHRQALMAAMQSFQGTMDSYNALARQAEPTMRRLPQIADNLDATLSATRRLSQSLSDPKGPLMGTLAS
AGNDLSSASQSMQAATNVLANETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSVLFGPAPATPGPGETGFAAPQVSAAP
SVAVPATARP

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35523; Mature: 35523

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRAHAFLAGLFTIGLAIFIALAVVWFNRDQTVRVPYEVVTRSTVNGLSPQAAVKYRGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCHHHHEECCC
DVGKVDSIRFDDRVPGQIIVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYDGGK
CCCCCCCEECCCCCCHHHEEEHEECCCCCCEEEHHHHHHHCCCCEEEEEEECCCCCCCCC
RAANPTRLETSDRRPARIAMEAGFLDELDKRGDQMLARIDQTLSSLSALFDDEHRQALMA
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMQSFQGTMDSYNALARQAEPTMRRLPQIADNLDATLSATRRLSQSLSDPKGPLMGTLAS
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AGNDLSSASQSMQAATNVLANETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSVLFGPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
PATPGPGETGFAAPQVSAAPSVAVPATARP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENRAHAFLAGLFTIGLAIFIALAVVWFNRDQTVRVPYEVVTRSTVNGLSPQAAVKYRGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCHHHHEECCC
DVGKVDSIRFDDRVPGQIIVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYDGGK
CCCCCCCEECCCCCCHHHEEEHEECCCCCCEEEHHHHHHHCCCCEEEEEEECCCCCCCCC
RAANPTRLETSDRRPARIAMEAGFLDELDKRGDQMLARIDQTLSSLSALFDDEHRQALMA
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMQSFQGTMDSYNALARQAEPTMRRLPQIADNLDATLSATRRLSQSLSDPKGPLMGTLAS
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AGNDLSSASQSMQAATNVLANETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSVLFGPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
PATPGPGETGFAAPQVSAAPSVAVPATARP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA