| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pcaD2 [H]
Identifier: 17545017
GI number: 17545017
Start: 330813
End: 331652
Strand: Reverse
Name: pcaD2 [H]
Synonym: RSc0298
Alternate gene names: 17545017
Gene position: 331652-330813 (Counterclockwise)
Preceding gene: 17545018
Following gene: 17545016
Centisome position: 8.92
GC content: 71.67
Gene sequence:
>840_bases ATGACCGCAGACGCCATCACCGAATCGGGCCACGCCGATGCCAACGGCATCCGCATCCGCTACCGCATCGACGGCGCGGA CGGGCCGTGGATCATGCTCGCGCACGCGCTCGGCGTGGACCACCAGATGTGGGACAGCATCGCGCACCGCCTCGCGTCGC GCCACCGGGTCCTGCGCTACGACGCGCGCGGCCATGGCGGCACGACGGCGCCGCACGGCACGTACACGCTGTTCCAGATG GCCGACGACGCGGCCGGCCTGCTCGATGCGCTGTCGATCCCGCAGGTCCATTTCGTCGGGCTGTCGATGGGCGGCATGGT GGCGCAGATCCTGGGCGTGCGGCACCCGCAGCGGCTGCTGTCGCTGACCCTGTGCGACACGGTCTGCCATACGCCCGTTG CCGCGCACGCCATGTGGGATGACCGCATCGGCCAGGTCGAGGCGCACGGCATGGCCGGCATCGTCGAGCCGACCCTGCAG CGCTGGCTGACCACGCCGTTCCGCGAAGCGCATCCCGAGGTGGCCGCGCGCATCCGCGCGCTGCTGCTGGCCACCCCGCC GCACGGCTATGTCGGCGCCTGCCTTGCCATCAAAGCGCTCGACACGCGCGATGCGCTGCCGCGCATTGCCTGCCCGGCCC TCGTGGTGGTCGGCGAAGACGATGCGGGCGCGCCGCCCGACGTCGCGCGCGCGATCGCCGGCAGCCTGCCGAACGCGCGT CTGAAAGTGATGCCGCATGCGGCCCACCTGGCCCCCATCGAACAGGAGGAGGCCTTCCTCACCGATCTGGACGAGTTCCT CGGGCACGCGGGATGCGGCAGTCAGTGCGAGACGCCCTGA
Upstream 100 bases:
>100_bases GCGGCTGGCTGCCGGTGCGCCTGCGCCAGACCGAACCCAGCGGCATGCAGTTCGAGCTCGTCTACCTGTCGCAGGACACC GCCCCCAACGGAGCCACACC
Downstream 100 bases:
>100_bases AGCGTCGCCGCACGCGATCGAGCTACAGGCGCCGCGCACACGGCGCGCTGTCCACCGGTCGGATGGAGGATGCGCGCTTG CGTCTTTCGGGGCAGAGGCG
Product: B-ketoadipate enol-lactone hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTADAITESGHADANGIRIRYRIDGADGPWIMLAHALGVDHQMWDSIAHRLASRHRVLRYDARGHGGTTAPHGTYTLFQM ADDAAGLLDALSIPQVHFVGLSMGGMVAQILGVRHPQRLLSLTLCDTVCHTPVAAHAMWDDRIGQVEAHGMAGIVEPTLQ RWLTTPFREAHPEVAARIRALLLATPPHGYVGACLAIKALDTRDALPRIACPALVVVGEDDAGAPPDVARAIAGSLPNAR LKVMPHAAHLAPIEQEEAFLTDLDEFLGHAGCGSQCETP
Sequences:
>Translated_279_residues MTADAITESGHADANGIRIRYRIDGADGPWIMLAHALGVDHQMWDSIAHRLASRHRVLRYDARGHGGTTAPHGTYTLFQM ADDAAGLLDALSIPQVHFVGLSMGGMVAQILGVRHPQRLLSLTLCDTVCHTPVAAHAMWDDRIGQVEAHGMAGIVEPTLQ RWLTTPFREAHPEVAARIRALLLATPPHGYVGACLAIKALDTRDALPRIACPALVVVGEDDAGAPPDVARAIAGSLPNAR LKVMPHAAHLAPIEQEEAFLTDLDEFLGHAGCGSQCETP >Mature_278_residues TADAITESGHADANGIRIRYRIDGADGPWIMLAHALGVDHQMWDSIAHRLASRHRVLRYDARGHGGTTAPHGTYTLFQMA DDAAGLLDALSIPQVHFVGLSMGGMVAQILGVRHPQRLLSLTLCDTVCHTPVAAHAMWDDRIGQVEAHGMAGIVEPTLQR WLTTPFREAHPEVAARIRALLLATPPHGYVGACLAIKALDTRDALPRIACPALVVVGEDDAGAPPDVARAIAGSLPNARL KVMPHAAHLAPIEQEEAFLTDLDEFLGHAGCGSQCETP
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29819; Mature: 29688
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADAITESGHADANGIRIRYRIDGADGPWIMLAHALGVDHQMWDSIAHRLASRHRVLRY CCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCEEEE DARGHGGTTAPHGTYTLFQMADDAAGLLDALSIPQVHFVGLSMGGMVAQILGVRHPQRLL ECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCHHHHH SLTLCDTVCHTPVAAHAMWDDRIGQVEAHGMAGIVEPTLQRWLTTPFREAHPEVAARIRA HHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH LLLATPPHGYVGACLAIKALDTRDALPRIACPALVVVGEDDAGAPPDVARAIAGSLPNAR HHEECCCCCHHHHHHHEEECCCHHCCCHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCE LKVMPHAAHLAPIEQEEAFLTDLDEFLGHAGCGSQCETP EEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TADAITESGHADANGIRIRYRIDGADGPWIMLAHALGVDHQMWDSIAHRLASRHRVLRY CCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCEEEE DARGHGGTTAPHGTYTLFQMADDAAGLLDALSIPQVHFVGLSMGGMVAQILGVRHPQRLL ECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCHHHHH SLTLCDTVCHTPVAAHAMWDDRIGQVEAHGMAGIVEPTLQRWLTTPFREAHPEVAARIRA HHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH LLLATPPHGYVGACLAIKALDTRDALPRIACPALVVVGEDDAGAPPDVARAIAGSLPNAR HHEECCCCCHHHHHHHEEECCCHHCCCHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCE LKVMPHAAHLAPIEQEEAFLTDLDEFLGHAGCGSQCETP EEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8181753 [H]