Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is rcsC [C]

Identifier: 17545010

GI number: 17545010

Start: 323618

End: 324058

Strand: Reverse

Name: rcsC [C]

Synonym: RSc0291

Alternate gene names: 17545010

Gene position: 324058-323618 (Counterclockwise)

Preceding gene: 17545011

Following gene: 17545009

Centisome position: 8.72

GC content: 65.08

Gene sequence:

>441_bases
ATGCTGGATCAAGCCGTCACCCTCTCCACCCGTGGCTTGCGCGTCCTGTTGATCGAGGATTCCCCCGTGCTGCGCGGCAT
GGTGCTGGAGTACCTCAAGGCCTCCGCCTTCGTGGCGGTGGTGGAATGGGCAGACACGGAAGACCTGGCACTGCGCCTGC
TGGCGCAAGGCCACTACGACGTCGTCATCGTGGACCTGCAACTGCGCCAGGGAAACGGCTTCAAGGTGCTGCAGTCGCTG
CGCGACCAGGCGTCGCCGAGCGTGCGCATCGTCTACACCAACCACGCCCAGGTGCCGACCTACCGGCAGCGCTGCTTCGA
AGCGGGCGCCAACTATTTCTTCGACAAATCGCTCGAGCTCGACAAGGTGTTCGAGGTCATCGAAGAGCGCGCGGGCATGG
TCCGCCCGCGTCCGCAGGCGGACCATCACCCCCACCACTGA

Upstream 100 bases:

>100_bases
AACGGTGGGGCCCCGAGACCCCGGCATCGGCCGCAAACCCTGTTGGCATGTAGGACAACATCCGATAGCACCCACTAAAC
CCGCTGGCTACCATCAACGC

Downstream 100 bases:

>100_bases
GCGGCACGGGCATCGTCCCGGACGGCATCCCCATCCCTCATCCCTTTTCCCCACGACCGAGGAGTCTGCGATGAAAACCC
TGTGTGCCGTCTTCGCCCTG

Product: transcription regulator protein

Products: NA

Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Response Regulator Receiver; Transcription Regulator Protein; CheY-Like Domain-Containing Protein; Response Regulator; Response Regulator CheY Family

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYDVVIVDLQLRQGNGFKVLQSL
RDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLELDKVFEVIEERAGMVRPRPQADHHPHH

Sequences:

>Translated_146_residues
MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYDVVIVDLQLRQGNGFKVLQSL
RDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLELDKVFEVIEERAGMVRPRPQADHHPHH
>Mature_146_residues
MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYDVVIVDLQLRQGNGFKVLQSL
RDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLELDKVFEVIEERAGMVRPRPQADHHPHH

Specific function: Member Of The Two-Component Regulatory System rcsC/rcsB Involved In The Regulation Of The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. rcsC Probably Functions As A Membrane-Associated Protein Kinase That Phosphorylates rcsB In Response

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.- [C]

Molecular weight: Translated: 16614; Mature: 16614

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYD
CCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCE
VVIVDLQLRQGNGFKVLQSLRDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLEL
EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCH
DKVFEVIEERAGMVRPRPQADHHPHH
HHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYD
CCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCE
VVIVDLQLRQGNGFKVLQSLRDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLEL
EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCH
DKVFEVIEERAGMVRPRPQADHHPHH
HHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA