| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is rcsC [C]
Identifier: 17545010
GI number: 17545010
Start: 323618
End: 324058
Strand: Reverse
Name: rcsC [C]
Synonym: RSc0291
Alternate gene names: 17545010
Gene position: 324058-323618 (Counterclockwise)
Preceding gene: 17545011
Following gene: 17545009
Centisome position: 8.72
GC content: 65.08
Gene sequence:
>441_bases ATGCTGGATCAAGCCGTCACCCTCTCCACCCGTGGCTTGCGCGTCCTGTTGATCGAGGATTCCCCCGTGCTGCGCGGCAT GGTGCTGGAGTACCTCAAGGCCTCCGCCTTCGTGGCGGTGGTGGAATGGGCAGACACGGAAGACCTGGCACTGCGCCTGC TGGCGCAAGGCCACTACGACGTCGTCATCGTGGACCTGCAACTGCGCCAGGGAAACGGCTTCAAGGTGCTGCAGTCGCTG CGCGACCAGGCGTCGCCGAGCGTGCGCATCGTCTACACCAACCACGCCCAGGTGCCGACCTACCGGCAGCGCTGCTTCGA AGCGGGCGCCAACTATTTCTTCGACAAATCGCTCGAGCTCGACAAGGTGTTCGAGGTCATCGAAGAGCGCGCGGGCATGG TCCGCCCGCGTCCGCAGGCGGACCATCACCCCCACCACTGA
Upstream 100 bases:
>100_bases AACGGTGGGGCCCCGAGACCCCGGCATCGGCCGCAAACCCTGTTGGCATGTAGGACAACATCCGATAGCACCCACTAAAC CCGCTGGCTACCATCAACGC
Downstream 100 bases:
>100_bases GCGGCACGGGCATCGTCCCGGACGGCATCCCCATCCCTCATCCCTTTTCCCCACGACCGAGGAGTCTGCGATGAAAACCC TGTGTGCCGTCTTCGCCCTG
Product: transcription regulator protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Response Regulator Receiver; Transcription Regulator Protein; CheY-Like Domain-Containing Protein; Response Regulator; Response Regulator CheY Family
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYDVVIVDLQLRQGNGFKVLQSL RDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLELDKVFEVIEERAGMVRPRPQADHHPHH
Sequences:
>Translated_146_residues MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYDVVIVDLQLRQGNGFKVLQSL RDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLELDKVFEVIEERAGMVRPRPQADHHPHH >Mature_146_residues MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYDVVIVDLQLRQGNGFKVLQSL RDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLELDKVFEVIEERAGMVRPRPQADHHPHH
Specific function: Member Of The Two-Component Regulatory System rcsC/rcsB Involved In The Regulation Of The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. rcsC Probably Functions As A Membrane-Associated Protein Kinase That Phosphorylates rcsB In Response
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 16614; Mature: 16614
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYD CCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCE VVIVDLQLRQGNGFKVLQSLRDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLEL EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCH DKVFEVIEERAGMVRPRPQADHHPHH HHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDQAVTLSTRGLRVLLIEDSPVLRGMVLEYLKASAFVAVVEWADTEDLALRLLAQGHYD CCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCE VVIVDLQLRQGNGFKVLQSLRDQASPSVRIVYTNHAQVPTYRQRCFEAGANYFFDKSLEL EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCH DKVFEVIEERAGMVRPRPQADHHPHH HHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA