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The map label for this gene is 17544939

Identifier: 17544939

GI number: 17544939

Start: 242316

End: 242786

Strand: Reverse

Name: 17544939

Synonym: RSc0220

Alternate gene names: NA

Gene position: 242786-242316 (Counterclockwise)

Preceding gene: 17544941

Following gene: 17544934

Centisome position: 6.53

GC content: 68.37

Gene sequence:

>471_bases
ATGCACGCCGAGCCCACGCCCGACTGGCGCGAACACGGAGTCCAGGTCATTCCGGGTTCGCAGCTCGACCTGAACACGCC
GCAGACGCCCGGCATGACGCGTGCCGCGGCCATCACCCAAGCGCGCACGGGCGCCAGCAAGCTGTGGGCGGGCGCGGTCA
CCATCGACGCCAATGCCAAGACGGGCGCCCACCATCACGGCGAACTGGAAAGCGTCATCTACGTGGTCAGCGGCCGGGCC
CGCATGCGCTGGGGCAATCACCTGGAGTTCACCGCCGAAGCCGGGCCCGGCGACTTCATCTACGTGCCGCCTTTCGTGCC
GCATCAAGAGATCAACGCGAGCCCGACCGAGACCCTCAGTTGCGTGATCGTGCGCAGCGGGCAGGAGCCCGTGGTCGTCA
ACCTGGACATCACGCCGGCCGAGCCGCCGCAGACGGTGTACTGGGTCGACCCCATCCATCCGCATCCGTGA

Upstream 100 bases:

>100_bases
CATCCCGCCGCCCACAACAGCCAGAAATCCGCCGCCGGCCCCGGTGCCAGCGCCTATGCTGGCATCAGCAACGCCATCCC
ACGCGCGCAAGGAGACCGCC

Downstream 100 bases:

>100_bases
AGCGGCACGGGCGCCCCGGCGCGCGCCTCACAGGGTCGGCAGTTGCTCGAAGCGGTCGAAGCGCGGAAACGGCGCCGGCA
CCTCGATGACCTCCATGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain-Containing Protein; Cupin 2 Barrel; Cupin Domain Protein; Mannose-6-Phosphate Isomerase; Mannose-6-Phosphate Isomerase Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MHAEPTPDWREHGVQVIPGSQLDLNTPQTPGMTRAAAITQARTGASKLWAGAVTIDANAKTGAHHHGELESVIYVVSGRA
RMRWGNHLEFTAEAGPGDFIYVPPFVPHQEINASPTETLSCVIVRSGQEPVVVNLDITPAEPPQTVYWVDPIHPHP

Sequences:

>Translated_156_residues
MHAEPTPDWREHGVQVIPGSQLDLNTPQTPGMTRAAAITQARTGASKLWAGAVTIDANAKTGAHHHGELESVIYVVSGRA
RMRWGNHLEFTAEAGPGDFIYVPPFVPHQEINASPTETLSCVIVRSGQEPVVVNLDITPAEPPQTVYWVDPIHPHP
>Mature_156_residues
MHAEPTPDWREHGVQVIPGSQLDLNTPQTPGMTRAAAITQARTGASKLWAGAVTIDANAKTGAHHHGELESVIYVVSGRA
RMRWGNHLEFTAEAGPGDFIYVPPFVPHQEINASPTETLSCVIVRSGQEPVVVNLDITPAEPPQTVYWVDPIHPHP

Specific function: Unknown

COG id: COG4101

COG function: function code G; Predicted mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16918; Mature: 16918

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAEPTPDWREHGVQVIPGSQLDLNTPQTPGMTRAAAITQARTGASKLWAGAVTIDANAK
CCCCCCCCHHHCCEEEECCCEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC
TGAHHHGELESVIYVVSGRARMRWGNHLEFTAEAGPGDFIYVPPFVPHQEINASPTETLS
CCCCCCCCCEEEEEEECCCEEECCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEE
CVIVRSGQEPVVVNLDITPAEPPQTVYWVDPIHPHP
EEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MHAEPTPDWREHGVQVIPGSQLDLNTPQTPGMTRAAAITQARTGASKLWAGAVTIDANAK
CCCCCCCCHHHCCEEEECCCEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC
TGAHHHGELESVIYVVSGRARMRWGNHLEFTAEAGPGDFIYVPPFVPHQEINASPTETLS
CCCCCCCCCEEEEEEECCCEEECCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEE
CVIVRSGQEPVVVNLDITPAEPPQTVYWVDPIHPHP
EEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA