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The map label for this gene is osmY [C]

Identifier: 17544908

GI number: 17544908

Start: 210491

End: 211138

Strand: Direct

Name: osmY [C]

Synonym: RSc0189

Alternate gene names: 17544908

Gene position: 210491-211138 (Clockwise)

Preceding gene: 17544907

Following gene: 17544910

Centisome position: 5.66

GC content: 64.81

Gene sequence:

>648_bases
ATGAAAAGCGACTTGGGTATCAAGCAGGACGTCAATGATGAACTGCTCTGGGAGCCCGCGGTGGATGCCGCAGGGATTGG
TGTGGAAGTCGACCACGGCGTGGTGACGCTCACCGGGCACGTGCGCTGCTACATGGAGAAAGTGGCCGCCGAACACGCCG
CCGAACGCGTCGCGGGTGTGCGCGGTGTGGTCCAGAAAATCGAGGTGCGCCTGCCTGGCGCACACACGGACGAGGACATT
GCTGAAGCGGCACGCTCGGCTCTGGAGTGGCACGCCAGTCTGCCGTCCAACCGCATCGAAGTTCTGCTGGAAAACGGCTG
GGTAACCCTCTCGGGCGACGTGGATTGGCCGTACCAGAGCGAGCTGGCGGCACACGCGGTTGGCTCGTTGCGCGGCGTGG
CCGGGCTGATCAACCGCCTGACGATCAAAACACGCGTGGTGCCGACCGACGTTGCCCAGCAGATCGGCGCTGCACTTAAG
CGGCATGCCGCGCGCGAAGCAGGCCATATCCGCGTGTCAGTCCAAGGTGGTACGGTGACGCTGAGCGGCCGCATCGATTC
AGCTTCGGAGCGCCGCGCAGCTAAAGGTGCCGCTTGGTCGGCGCCTGGCGTGACGGAGGTCATCGACCATCTGCAGCTCG
CGCCATGA

Upstream 100 bases:

>100_bases
TGCAGGCTCAACCGACCGCTCTGCGCTGTCTGACCTGTCAGGCGGCGCGCGAGCGCAAATGGGCCTAGTCAGGGGAATGG
GAGCACAGTAGGAGTGAGGT

Downstream 100 bases:

>100_bases
TGACAAACACGCCACCCGCGAGAGTGGCGTGTTTGCATCGTATTCGCGTATACGGCTATAGCTCGCTGAGCGCTGCCTTG
TTGGCGAGTTCGATTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKSDLGIKQDVNDELLWEPAVDAAGIGVEVDHGVVTLTGHVRCYMEKVAAEHAAERVAGVRGVVQKIEVRLPGAHTDEDI
AEAARSALEWHASLPSNRIEVLLENGWVTLSGDVDWPYQSELAAHAVGSLRGVAGLINRLTIKTRVVPTDVAQQIGAALK
RHAAREAGHIRVSVQGGTVTLSGRIDSASERRAAKGAAWSAPGVTEVIDHLQLAP

Sequences:

>Translated_215_residues
MKSDLGIKQDVNDELLWEPAVDAAGIGVEVDHGVVTLTGHVRCYMEKVAAEHAAERVAGVRGVVQKIEVRLPGAHTDEDI
AEAARSALEWHASLPSNRIEVLLENGWVTLSGDVDWPYQSELAAHAVGSLRGVAGLINRLTIKTRVVPTDVAQQIGAALK
RHAAREAGHIRVSVQGGTVTLSGRIDSASERRAAKGAAWSAPGVTEVIDHLQLAP
>Mature_215_residues
MKSDLGIKQDVNDELLWEPAVDAAGIGVEVDHGVVTLTGHVRCYMEKVAAEHAAERVAGVRGVVQKIEVRLPGAHTDEDI
AEAARSALEWHASLPSNRIEVLLENGWVTLSGDVDWPYQSELAAHAVGSLRGVAGLINRLTIKTRVVPTDVAQQIGAALK
RHAAREAGHIRVSVQGGTVTLSGRIDSASERRAAKGAAWSAPGVTEVIDHLQLAP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22855; Mature: 22855

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDLGIKQDVNDELLWEPAVDAAGIGVEVDHGVVTLTGHVRCYMEKVAAEHAAERVAGV
CCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
RGVVQKIEVRLPGAHTDEDIAEAARSALEWHASLPSNRIEVLLENGWVTLSGDVDWPYQS
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCHHH
ELAAHAVGSLRGVAGLINRLTIKTRVVPTDVAQQIGAALKRHAAREAGHIRVSVQGGTVT
HHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEE
LSGRIDSASERRAAKGAAWSAPGVTEVIDHLQLAP
EECCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKSDLGIKQDVNDELLWEPAVDAAGIGVEVDHGVVTLTGHVRCYMEKVAAEHAAERVAGV
CCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
RGVVQKIEVRLPGAHTDEDIAEAARSALEWHASLPSNRIEVLLENGWVTLSGDVDWPYQS
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCHHH
ELAAHAVGSLRGVAGLINRLTIKTRVVPTDVAQQIGAALKRHAAREAGHIRVSVQGGTVT
HHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEE
LSGRIDSASERRAAKGAAWSAPGVTEVIDHLQLAP
EECCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA