Click here to switch to the map view.

The map label for this gene is 17544906

Identifier: 17544906

GI number: 17544906

Start: 209518

End: 210048

Strand: Direct

Name: 17544906

Synonym: RSc0187

Alternate gene names: NA

Gene position: 209518-210048 (Clockwise)

Preceding gene: 17544905

Following gene: 17544907

Centisome position: 5.64

GC content: 61.96

Gene sequence:

>531_bases
ATGGAAAAGAACTTGATCGTGTACTACTCCCGCACCGGTACTGCGCGGCAGGTAGCAGAGCAGATGGCAGCACAAAGCGG
CTGGCAGCTCGCCGAAGTCTCGGATGAATACCCACGAGCCGGTTTTTTCGGTGATCTGCGCTGCGTAGTCGAGACGGTTT
TCCACAAGCGCGCCAAGTATCGCTACGCAGGACCGCCGCTAACGGAGGTCGACCAGGTCATCGTGATGGCGCCTATCTGG
ATGGGCCACTTGGCGTCGCCCATGCGGGACTTCTTGGCTGACCAGTCGCCGTTCTCGGCGAATCTGTCAGTGATCTGTGT
CATGGCTTCGCGCGGGGCATTTGCCGCCGTCGAGGAGATCGCACGTATCACCGCTAGCCTTCCGGCCCCCGTCCTGGCGC
TTTGCCAGCGTGACGTGCTCAGCGGCCTTTCGCAGCAAGAGATCGCAGGCTTCATCGACCAGGTGAAGACTGCTGGCAAG
TGGGAGCAGTCCAAGCGGCGGCCGGCGTGGCTCTCGCCCACCGAAGCCTGA

Upstream 100 bases:

>100_bases
CTGGGATGCACCGGGTGTGCGCGCCGTTATCGACAACATGTGGGTGGGCACCTAACCAAGGCCTGCGCCTCTCTTCCTTG
CACATCACGGGATGTCTGTC

Downstream 100 bases:

>100_bases
CCCCCGCACACGGATTTCGCGTCGGACCGAAAAGCAGGAGACTGGGCATGACCCGTTTTACCGAGGCGTAATGGAAGCGG
CTCATTGCGCTGCTCGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MEKNLIVYYSRTGTARQVAEQMAAQSGWQLAEVSDEYPRAGFFGDLRCVVETVFHKRAKYRYAGPPLTEVDQVIVMAPIW
MGHLASPMRDFLADQSPFSANLSVICVMASRGAFAAVEEIARITASLPAPVLALCQRDVLSGLSQQEIAGFIDQVKTAGK
WEQSKRRPAWLSPTEA

Sequences:

>Translated_176_residues
MEKNLIVYYSRTGTARQVAEQMAAQSGWQLAEVSDEYPRAGFFGDLRCVVETVFHKRAKYRYAGPPLTEVDQVIVMAPIW
MGHLASPMRDFLADQSPFSANLSVICVMASRGAFAAVEEIARITASLPAPVLALCQRDVLSGLSQQEIAGFIDQVKTAGK
WEQSKRRPAWLSPTEA
>Mature_176_residues
MEKNLIVYYSRTGTARQVAEQMAAQSGWQLAEVSDEYPRAGFFGDLRCVVETVFHKRAKYRYAGPPLTEVDQVIVMAPIW
MGHLASPMRDFLADQSPFSANLSVICVMASRGAFAAVEEIARITASLPAPVLALCQRDVLSGLSQQEIAGFIDQVKTAGK
WEQSKRRPAWLSPTEA

Specific function: Unknown

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19438; Mature: 19438

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNLIVYYSRTGTARQVAEQMAAQSGWQLAEVSDEYPRAGFFGDLRCVVETVFHKRAKY
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RYAGPPLTEVDQVIVMAPIWMGHLASPMRDFLADQSPFSANLSVICVMASRGAFAAVEEI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHH
ARITASLPAPVLALCQRDVLSGLSQQEIAGFIDQVKTAGKWEQSKRRPAWLSPTEA
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEKNLIVYYSRTGTARQVAEQMAAQSGWQLAEVSDEYPRAGFFGDLRCVVETVFHKRAKY
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RYAGPPLTEVDQVIVMAPIWMGHLASPMRDFLADQSPFSANLSVICVMASRGAFAAVEEI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHH
ARITASLPAPVLALCQRDVLSGLSQQEIAGFIDQVKTAGKWEQSKRRPAWLSPTEA
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA