| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17544899
Identifier: 17544899
GI number: 17544899
Start: 204048
End: 204305
Strand: Reverse
Name: 17544899
Synonym: RSc0180
Alternate gene names: NA
Gene position: 204305-204048 (Counterclockwise)
Preceding gene: 17544900
Following gene: 17544898
Centisome position: 5.5
GC content: 63.95
Gene sequence:
>258_bases GTGGTTTGCGGTGGCAGCCCCATGAGCGACATCCCCACGTTTCCGTACCGGCTGCTGTGGGAGGAGCGCAAGCTCGTCTC AGTGGCTAACCTGACGCGATCGGATGGCCTGGCGCTCATGCACGTGGCGGCTGCAGTACCCCTGCAGGTTCACGTCATGC CGTATCGACTGCAGGAAACCAACACCGCTCTGGACAACCTGCGTGCCGGGCGCATTGCCTGCGCGGCGGTATTGGGAATC GCCCCGGAAGAGCGTTGA
Upstream 100 bases:
>100_bases CATCGATCGGCTCCGGAGCTGCTCGACGCGGCTCTGATCTTTGCCCCGGTGGGCGCGCAGGTGCAGCAAGCGCTGCAAGC TGTCGTCAAAGGGGGGTACC
Downstream 100 bases:
>100_bases TATGGGTCAATGAGCCCAGCATCCTGCCGCCTACGCTGGTGACATGCGGCACTGTCCCGCACAACGCCTTTGGAGACCGT CATGTACCAACGCATCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alcohol Dehydrogenase GroES-Like Protein; Alcohol Dehydrogenase Zinc-Containing; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; Alcohol Dehydrogenase-Like Oxidoreductase Protein; Zn-Dependent Alcohol Dehydrogenase; Alcohol Dehydrogenase Protein; Alcohol Dehydrogenase GroES Domain Protein; NAD-Dependent Alcohol Dehydrogenase; Zinc-Containing Alcohol Dehydrogenase; Zinc-Containing Alcohol Dehydrogenase Superfamily; Alcohol Dehydrogenase Zn-Dependent; Zn-Containing Alcohol Dehydrogenase
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MVCGGSPMSDIPTFPYRLLWEERKLVSVANLTRSDGLALMHVAAAVPLQVHVMPYRLQETNTALDNLRAGRIACAAVLGI APEER
Sequences:
>Translated_85_residues MVCGGSPMSDIPTFPYRLLWEERKLVSVANLTRSDGLALMHVAAAVPLQVHVMPYRLQETNTALDNLRAGRIACAAVLGI APEER >Mature_85_residues MVCGGSPMSDIPTFPYRLLWEERKLVSVANLTRSDGLALMHVAAAVPLQVHVMPYRLQETNTALDNLRAGRIACAAVLGI APEER
Specific function: Unknown
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9274; Mature: 9274
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCGGSPMSDIPTFPYRLLWEERKLVSVANLTRSDGLALMHVAAAVPLQVHVMPYRLQET CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCEEEEEEEEEECCH NTALDNLRAGRIACAAVLGIAPEER HHHHHHCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MVCGGSPMSDIPTFPYRLLWEERKLVSVANLTRSDGLALMHVAAAVPLQVHVMPYRLQET CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCEEEEEEEEEECCH NTALDNLRAGRIACAAVLGIAPEER HHHHHHCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA