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The map label for this gene is yiaA [H]

Identifier: 17544860

GI number: 17544860

Start: 163152

End: 163652

Strand: Direct

Name: yiaA [H]

Synonym: RSc0141

Alternate gene names: 17544860

Gene position: 163152-163652 (Clockwise)

Preceding gene: 17544859

Following gene: 17544861

Centisome position: 4.39

GC content: 66.67

Gene sequence:

>501_bases
ATGAAGCCGCAAGTCCAACCGCCGTCGTTCGCATTCGTTGCCGTCTCGTGGACGGCCTTGCTGCTCGGGTTTGCCGCCTA
CCTGATCGGTGTGTGGAACGCGAACATGCAGCTCAACGAGCGCGGCTATTACTTCACCGTCCTCGTCTACGGGCTGTTCG
CGGCGGTGTCGGTGCAGAAGTCCGTGCGCGACCGGGTCGAAGACGTTCCGGTCACCGGCATTTACTACGGCCTGTGCTGG
CTGTCCGCGCTGCTGGCGGTGGGGCTGCTGTGCGTCGGACTCTACAACGCCACGCTGGCCCAGAGCGAGAAGGGCTTCTT
CGGCATGGCCTACGCGCTGGCGCTGTTCGGCGCCATTGCTGTCCAGAAGAACACCCGCGACATCACCGCAACCAAGCCGG
TGACCCTGGAGGCACGCCTGGCCCAGTTGCGCGAGGAGGCGCCCAAGGCGCCGGCGTTGAACCCGGCCGCGGCATCCGAG
ACGCCGGTGCGCCGCGGCTGA

Upstream 100 bases:

>100_bases
GATCGGGGCGTTGCTGGCCGTGTGCGTGAAGCTTAACCATGCGGCGCCGGGCGGATGGTAAATTGGCGCGCCAATAACAC
CATTGCCCGAGGGAGTCCTG

Downstream 100 bases:

>100_bases
TCCGGCACGGGCGGCCGGTCCGCCACATTTTTGCGGCGATGCGGCAATTTCCACCACAGCCGCTACAATGCAAGGCTCAC
GCGCCGGCACGGGGCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKPQVQPPSFAFVAVSWTALLLGFAAYLIGVWNANMQLNERGYYFTVLVYGLFAAVSVQKSVRDRVEDVPVTGIYYGLCW
LSALLAVGLLCVGLYNATLAQSEKGFFGMAYALALFGAIAVQKNTRDITATKPVTLEARLAQLREEAPKAPALNPAAASE
TPVRRG

Sequences:

>Translated_166_residues
MKPQVQPPSFAFVAVSWTALLLGFAAYLIGVWNANMQLNERGYYFTVLVYGLFAAVSVQKSVRDRVEDVPVTGIYYGLCW
LSALLAVGLLCVGLYNATLAQSEKGFFGMAYALALFGAIAVQKNTRDITATKPVTLEARLAQLREEAPKAPALNPAAASE
TPVRRG
>Mature_166_residues
MKPQVQPPSFAFVAVSWTALLLGFAAYLIGVWNANMQLNERGYYFTVLVYGLFAAVSVQKSVRDRVEDVPVTGIYYGLCW
LSALLAVGLLCVGLYNATLAQSEKGFFGMAYALALFGAIAVQKNTRDITATKPVTLEARLAQLREEAPKAPALNPAAASE
TPVRRG

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082292, Length=133, Percent_Identity=56.390977443609, Blast_Score=152, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 17949; Mature: 17949

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQVQPPSFAFVAVSWTALLLGFAAYLIGVWNANMQLNERGYYFTVLVYGLFAAVSVQK
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHH
SVRDRVEDVPVTGIYYGLCWLSALLAVGLLCVGLYNATLAQSEKGFFGMAYALALFGAIA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VQKNTRDITATKPVTLEARLAQLREEAPKAPALNPAAASETPVRRG
HCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPQVQPPSFAFVAVSWTALLLGFAAYLIGVWNANMQLNERGYYFTVLVYGLFAAVSVQK
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHH
SVRDRVEDVPVTGIYYGLCWLSALLAVGLLCVGLYNATLAQSEKGFFGMAYALALFGAIA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VQKNTRDITATKPVTLEARLAQLREEAPKAPALNPAAASETPVRRG
HCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]