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The map label for this gene is 17544844

Identifier: 17544844

GI number: 17544844

Start: 147567

End: 147887

Strand: Direct

Name: 17544844

Synonym: RSc0125

Alternate gene names: NA

Gene position: 147567-147887 (Clockwise)

Preceding gene: 17544843

Following gene: 17544848

Centisome position: 3.97

GC content: 61.99

Gene sequence:

>321_bases
ATGACTGAGACCCGCTTCAAGAGCGATGCCTCGGAGGCCGTTCATAGCGCCGCTTCCGGCCTGCACCGCGCAGGCCTGAT
CGGCAAGAAGACCATGCGCGAATACGACGCGCTCTGCATCGAGGCCGTGCCGGCCTTCGATGCGCAGGCCATTGCCCGTA
TCCGCCAGTCGGTCAACGTCAGTCAGAGCGTGTTTGCGGCCTATCTCAATACGACCACGTCAACGGTCCGGCAGTGGGAG
CAGGGTGACAAGAAGCCGAGCGGCATGGCTGCACGCCTGCTCCAGCTTGTGCAAAAGCACGGATTGGCCTTGTTTTCGTG
A

Upstream 100 bases:

>100_bases
GAGTTGGCGGCATTCAGGAAGCTCGCCTCCGACTTCGGCCGGTGTGCGCGCGCCGACCTCGACCGGCTGGTCGAACTGAA
AGCGCGTGTGGAGGTTTGTC

Downstream 100 bases:

>100_bases
GCGAAGCCTGCCGCGGGCAGGCACGTCCACGCCTTGTGGAGGTTGCCGCGGTCCCGCCCGGCGCCGCATCAACAAAAACC
CCGCCAACCGGCGGGGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator-Related Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTETRFKSDASEAVHSAASGLHRAGLIGKKTMREYDALCIEAVPAFDAQAIARIRQSVNVSQSVFAAYLNTTTSTVRQWE
QGDKKPSGMAARLLQLVQKHGLALFS

Sequences:

>Translated_106_residues
MTETRFKSDASEAVHSAASGLHRAGLIGKKTMREYDALCIEAVPAFDAQAIARIRQSVNVSQSVFAAYLNTTTSTVRQWE
QGDKKPSGMAARLLQLVQKHGLALFS
>Mature_105_residues
TETRFKSDASEAVHSAASGLHRAGLIGKKTMREYDALCIEAVPAFDAQAIARIRQSVNVSQSVFAAYLNTTTSTVRQWEQ
GDKKPSGMAARLLQLVQKHGLALFS

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11538; Mature: 11407

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETRFKSDASEAVHSAASGLHRAGLIGKKTMREYDALCIEAVPAFDAQAIARIRQSVNV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
SQSVFAAYLNTTTSTVRQWEQGDKKPSGMAARLLQLVQKHGLALFS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TETRFKSDASEAVHSAASGLHRAGLIGKKTMREYDALCIEAVPAFDAQAIARIRQSVNV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
SQSVFAAYLNTTTSTVRQWEQGDKKPSGMAARLLQLVQKHGLALFS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA