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The map label for this gene is phnB [C]

Identifier: 17544826

GI number: 17544826

Start: 125236

End: 125715

Strand: Reverse

Name: phnB [C]

Synonym: RSc0107

Alternate gene names: 17544826

Gene position: 125715-125236 (Counterclockwise)

Preceding gene: 17544827

Following gene: 17544824

Centisome position: 3.38

GC content: 64.58

Gene sequence:

>480_bases
ATGGCGGTCAAACCCATCCCCGAGGGTTACCACAGCGTCACCCCGTACCTGAGCATCAAAGGCGCCGACAAGGCCCTCGA
TTTCTACAAGCAGGCCTTCGGCGCCACCGAGATCATGCGCATGGCCGGCCCGAACGGCGCCATCGCGCACGCCGAGATCC
GCATCGGCGATTCGCCGGTCATGATGGCCGACGAAATGCCCAACATGAGCTGCGCCAGCCCCGACACGCTGCAGAGCACG
TCGGTCGGCCTGATGATCTATGTGAAGGATGTCGATGCGGTCTTCGCCAACGCCATCAAGACGGGCGCCACCGAAGTGCG
GCCGGTGCAGAACCAGTTCTACGGCGACCGCTCCGGCACGCTGAAAGACCCGTTCGGCCACGTGTGGACGATCTCGACCC
ATGTGGAAGACGTGGCGCCGGACGAGATGAAGCGGCGCATGGACAAGTGGACGCAGGAGCAGGCGGGCGCTACGGCCTGA

Upstream 100 bases:

>100_bases
CCCATCGCGCAACGGTCATCCGCCTGACCTATCCTGTTGCATGCGCCGCCGCAGCGGTCGTTGCGGCGACGCATCCCCAA
CCACGCTGCAGGAGGCAGAC

Downstream 100 bases:

>100_bases
CATTCCAGCACGGCACGCATTGACTTAAGCGCGAGCGCTTGGCTCGCGCTTCTTTTTGGGGAAATGGCCGACGTGCAGCG
AGAAATCCGAGAGGGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAVKPIPEGYHSVTPYLSIKGADKALDFYKQAFGATEIMRMAGPNGAIAHAEIRIGDSPVMMADEMPNMSCASPDTLQST
SVGLMIYVKDVDAVFANAIKTGATEVRPVQNQFYGDRSGTLKDPFGHVWTISTHVEDVAPDEMKRRMDKWTQEQAGATA

Sequences:

>Translated_159_residues
MAVKPIPEGYHSVTPYLSIKGADKALDFYKQAFGATEIMRMAGPNGAIAHAEIRIGDSPVMMADEMPNMSCASPDTLQST
SVGLMIYVKDVDAVFANAIKTGATEVRPVQNQFYGDRSGTLKDPFGHVWTISTHVEDVAPDEMKRRMDKWTQEQAGATA
>Mature_158_residues
AVKPIPEGYHSVTPYLSIKGADKALDFYKQAFGATEIMRMAGPNGAIAHAEIRIGDSPVMMADEMPNMSCASPDTLQSTS
VGLMIYVKDVDAVFANAIKTGATEVRPVQNQFYGDRSGTLKDPFGHVWTISTHVEDVAPDEMKRRMDKWTQEQAGATA

Specific function: Unknown

COG id: COG2764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 17312; Mature: 17181

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKPIPEGYHSVTPYLSIKGADKALDFYKQAFGATEIMRMAGPNGAIAHAEIRIGDSPV
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEEEECCCCE
MMADEMPNMSCASPDTLQSTSVGLMIYVKDVDAVFANAIKTGATEVRPVQNQFYGDRSGT
EEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC
LKDPFGHVWTISTHVEDVAPDEMKRRMDKWTQEQAGATA
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AVKPIPEGYHSVTPYLSIKGADKALDFYKQAFGATEIMRMAGPNGAIAHAEIRIGDSPV
CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEEEECCCCE
MMADEMPNMSCASPDTLQSTSVGLMIYVKDVDAVFANAIKTGATEVRPVQNQFYGDRSGT
EEECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC
LKDPFGHVWTISTHVEDVAPDEMKRRMDKWTQEQAGATA
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]