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The map label for this gene is 17544820

Identifier: 17544820

GI number: 17544820

Start: 113718

End: 114080

Strand: Direct

Name: 17544820

Synonym: RSc0101

Alternate gene names: NA

Gene position: 113718-114080 (Clockwise)

Preceding gene: 17544819

Following gene: 17544822

Centisome position: 3.06

GC content: 68.87

Gene sequence:

>363_bases
ATGACATCCGCCCGGATCACGCTTTCCCGCTGCCTTGCCGGCACCGCGCTATGCCTGCTGGCGGGCGCCTGCGACGTCGG
CTTTGTCGCCGTCATCGGCAGCACGCTGAGCATCGGCGGCACCGTGACCGGCCTGCCCGCCAACCAGTCGCTGGTGCTGC
TCGACAATGGCCGCGATGCGCTGACGATCACGGCCAACGGCCCGTTCGTGTTTGCCGCGACGGTTCCGTTCAATGGCGGC
TATACGGTGACGATCGGCACGCAGCCGTCGTCGGCGTCCTGCGCGGTGAGCAACGGCAGCGGCATCGCGACGGCCGATGT
GACCAGCGTGGTCGTGACCTGCCAGCCGGTGGGCAGCGCTTAG

Upstream 100 bases:

>100_bases
AATCACGGCTTTGCGCCGCGCCCGCTGGCCGCGCCACGCGCGGTGGACGTGGGCGACGCGGACTGATTCCGCCGATGCCG
CGGGCAGCGATGGAGGCACC

Downstream 100 bases:

>100_bases
GCGCGGGCGACCTGCGCGCACGGGCGGATGCGGCGGCGGCCATCCGGCTGGGCGGCATCGCGAACGCTGCAGGAAAGAAG
AGAACGGGCGCGAGCGGGCT

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: Hemagglutinin-Related Protein; 40-Residue YVTN Family Beta-Propeller Repeat Protein

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTSARITLSRCLAGTALCLLAGACDVGFVAVIGSTLSIGGTVTGLPANQSLVLLDNGRDALTITANGPFVFAATVPFNGG
YTVTIGTQPSSASCAVSNGSGIATADVTSVVVTCQPVGSA

Sequences:

>Translated_120_residues
MTSARITLSRCLAGTALCLLAGACDVGFVAVIGSTLSIGGTVTGLPANQSLVLLDNGRDALTITANGPFVFAATVPFNGG
YTVTIGTQPSSASCAVSNGSGIATADVTSVVVTCQPVGSA
>Mature_119_residues
TSARITLSRCLAGTALCLLAGACDVGFVAVIGSTLSIGGTVTGLPANQSLVLLDNGRDALTITANGPFVFAATVPFNGGY
TVTIGTQPSSASCAVSNGSGIATADVTSVVVTCQPVGSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11652; Mature: 11521

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSARITLSRCLAGTALCLLAGACDVGFVAVIGSTLSIGGTVTGLPANQSLVLLDNGRDA
CCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCEEEECCCCCEEEEEECCCCE
LTITANGPFVFAATVPFNGGYTVTIGTQPSSASCAVSNGSGIATADVTSVVVTCQPVGSA
EEEEECCCEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCEEEECCEEEEEEEEECCCC
>Mature Secondary Structure 
TSARITLSRCLAGTALCLLAGACDVGFVAVIGSTLSIGGTVTGLPANQSLVLLDNGRDA
CCCEEEHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCEEEECCCCCEEEEEECCCCE
LTITANGPFVFAATVPFNGGYTVTIGTQPSSASCAVSNGSGIATADVTSVVVTCQPVGSA
EEEEECCCEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCEEEECCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA