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The map label for this gene is ybjT [C]

Identifier: 17544806

GI number: 17544806

Start: 100460

End: 101464

Strand: Reverse

Name: ybjT [C]

Synonym: RSc0087

Alternate gene names: 17544806

Gene position: 101464-100460 (Counterclockwise)

Preceding gene: 17544807

Following gene: 17544805

Centisome position: 2.73

GC content: 71.94

Gene sequence:

>1005_bases
ATGCGAACCTCCAACCTGCTCGTGCTGGGCGGCACCGGATTCATCGGCACCCAGCTGCTGTCGCGCCTCGTCACCGAAAC
CTTTGCCGCGCCCGGACTGCCCGACGGCCGCGTCATCGTGCCGACCCGCGACGCGGAATCTGCCCGGGCACACAACCTGA
CGCTGCTGCCGCGCGTGGACGTGATGGAAGCCGACGTGCACGCCGACGACGCCCTCGATGCACTGTTCCTCGCGCTCACC
GAGGGCGGCGGCGAACACTGCGCCGTGATCAACCTGGTGGGCGTCCTGCAGGACGTGCGCGCCGCGCCCTACGGCCCAGC
CTTCCGCCGCGCCCATGTCGACCTGCCGCGCCGCGTGGTGGACGCCTGCCGACGCCATGGGGTGAAGCGCCTGCTGCACA
TGAGCGCGCTGGGCGCCGATCCGGCCGGCCCATCGATGTACCAGCGCAGCAAGGGCGACGGCGAGCGCATCGTCACCGGC
AGCGACCTGGACTGGACGGTGTTCCGCCCGTCCGTCGTGTTCGGCCCCGGCGATCACTTCCTCAACCTGTTCGCGCGCCT
GCAGCGCCTCGCGCCGTTCGTGCCGCTGGCCCGCGCCGAAGCGCGCTTCCAGCCCGTGTACGTGGATGACGTGGCCGCGG
CGTTCGCCCACGCGCTGGACAACCCGGCCACCTTCGGCCACGTCTATCCGCTGGTCGGCCCGCGCGTCTACACGCTGGCC
GAGCTGGTGCGCTTCGCCGGCACGGCCAGCGGCCACCCGCGCTGGATCGTGCCGCTGTCGGACGCCATGGGCCGCCTGCA
GGCCACGCTGTTCGAACAGTTGCCCGGCTCGCCGCTCTCGCGCGACAACCTCGACTCCATGCGCATCGACAACATCAGCG
CCGAGCCGATCGCCCCGGAGCTCGACATCCACCCGCTGGGCATGGAAGCCGTGATGACCGCGACCCTGGCTGGGCGCGGC
CCCAACGGCAGGCTCGGCGATGCGCGGGCGCGTGCCCATCGCTAG

Upstream 100 bases:

>100_bases
CAGATGCGCCATGGCGATCACGCGGTGCCTGACGCGCGCCTTGTCGGTATCGGCGCGCGCGGCCTATTGTTTTTCTGTTC
CTTCCCTCCGGAACACGATC

Downstream 100 bases:

>100_bases
GGCCACGCCGCCCCTGCCGGTGGCGTGGCGTAGTGAGCCCATTTCACAACCGTGGGCAAACGGATTCGTTTGGCCGCGCA
GCATCGCAGGGCTAGAATGA

Product: NADH-ubiquinone oxidoreductase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; Oxidoreductase Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH-Ubiquinone Oxidoreductase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxireductase; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; Homolog NADH Dehydrogenase; Epimerase; Male Sterility-Like Protein; NmrA Family Protein; NADH Dehydrogenase-Like Protein; Nucleoside-Diphosphate-Sugar Epimerases; Dtdp-Glucose-46-Dehydratase; NAD Dependent Epimerase; NADH Dehydrogenase 1 Alpha Subcomplex; Nucleoside-Diphosphate Sugar Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; Dehydrogenase; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Male Sterility Domain-Containing Protein

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MRTSNLLVLGGTGFIGTQLLSRLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVDVMEADVHADDALDALFLALT
EGGGEHCAVINLVGVLQDVRAAPYGPAFRRAHVDLPRRVVDACRRHGVKRLLHMSALGADPAGPSMYQRSKGDGERIVTG
SDLDWTVFRPSVVFGPGDHFLNLFARLQRLAPFVPLARAEARFQPVYVDDVAAAFAHALDNPATFGHVYPLVGPRVYTLA
ELVRFAGTASGHPRWIVPLSDAMGRLQATLFEQLPGSPLSRDNLDSMRIDNISAEPIAPELDIHPLGMEAVMTATLAGRG
PNGRLGDARARAHR

Sequences:

>Translated_334_residues
MRTSNLLVLGGTGFIGTQLLSRLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVDVMEADVHADDALDALFLALT
EGGGEHCAVINLVGVLQDVRAAPYGPAFRRAHVDLPRRVVDACRRHGVKRLLHMSALGADPAGPSMYQRSKGDGERIVTG
SDLDWTVFRPSVVFGPGDHFLNLFARLQRLAPFVPLARAEARFQPVYVDDVAAAFAHALDNPATFGHVYPLVGPRVYTLA
ELVRFAGTASGHPRWIVPLSDAMGRLQATLFEQLPGSPLSRDNLDSMRIDNISAEPIAPELDIHPLGMEAVMTATLAGRG
PNGRLGDARARAHR
>Mature_334_residues
MRTSNLLVLGGTGFIGTQLLSRLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVDVMEADVHADDALDALFLALT
EGGGEHCAVINLVGVLQDVRAAPYGPAFRRAHVDLPRRVVDACRRHGVKRLLHMSALGADPAGPSMYQRSKGDGERIVTG
SDLDWTVFRPSVVFGPGDHFLNLFARLQRLAPFVPLARAEARFQPVYVDDVAAAFAHALDNPATFGHVYPLVGPRVYTLA
ELVRFAGTASGHPRWIVPLSDAMGRLQATLFEQLPGSPLSRDNLDSMRIDNISAEPIAPELDIHPLGMEAVMTATLAGRG
PNGRLGDARARAHR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=309, Percent_Identity=28.4789644012945, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17556106, Length=257, Percent_Identity=28.7937743190661, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24667554, Length=248, Percent_Identity=30.6451612903226, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 35997; Mature: 35997

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSNLLVLGGTGFIGTQLLSRLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVD
CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCEEEECCCC
VMEADVHADDALDALFLALTEGGGEHCAVINLVGVLQDVRAAPYGPAFRRAHVDLPRRVV
CEECCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH
DACRRHGVKRLLHMSALGADPAGPSMYQRSKGDGERIVTGSDLDWTVFRPSVVFGPGDHF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEECCCCCEEEECCEEEECCCHHH
LNLFARLQRLAPFVPLARAEARFQPVYVDDVAAAFAHALDNPATFGHVYPLVGPRVYTLA
HHHHHHHHHHCCCCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHH
ELVRFAGTASGHPRWIVPLSDAMGRLQATLFEQLPGSPLSRDNLDSMRIDNISAEPIAPE
HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCC
LDIHPLGMEAVMTATLAGRGPNGRLGDARARAHR
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MRTSNLLVLGGTGFIGTQLLSRLVTETFAAPGLPDGRVIVPTRDAESARAHNLTLLPRVD
CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCEEEECCCC
VMEADVHADDALDALFLALTEGGGEHCAVINLVGVLQDVRAAPYGPAFRRAHVDLPRRVV
CEECCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH
DACRRHGVKRLLHMSALGADPAGPSMYQRSKGDGERIVTGSDLDWTVFRPSVVFGPGDHF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEECCCCCEEEECCEEEECCCHHH
LNLFARLQRLAPFVPLARAEARFQPVYVDDVAAAFAHALDNPATFGHVYPLVGPRVYTLA
HHHHHHHHHHCCCCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHH
ELVRFAGTASGHPRWIVPLSDAMGRLQATLFEQLPGSPLSRDNLDSMRIDNISAEPIAPE
HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCC
LDIHPLGMEAVMTATLAGRGPNGRLGDARARAHR
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA