| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544799
Identifier: 17544799
GI number: 17544799
Start: 93670
End: 93975
Strand: Direct
Name: 17544799
Synonym: RSc0080
Alternate gene names: NA
Gene position: 93670-93975 (Clockwise)
Preceding gene: 17544798
Following gene: 17544800
Centisome position: 2.52
GC content: 65.03
Gene sequence:
>306_bases ATGGCACTCGTTGGCACCGGTCACCATTTCCATTTCCACGCTTTCGACGGCATCAGCCGCAAGACGCGGTTGACCTGGCT GCGCAACGCGGCGGCCCTGACGTGCCTGGCAGCGCTCATCGCGACCATGTGGGTGGGCGGCAATCTGTCGGCCCTGATGC ATACGCCGATCCTGGATGGCGTTTCGCCGCTGGCGGCGGTGGTTCTGCTGGCGTGCAGCTGCATGGCGATCAGCCTGCTC AGCCTCATCGCCGCGGGGTTCTTCCAGTTCCGCATGGAACAGCTCGATACGCTGGCGACCGCCTGA
Upstream 100 bases:
>100_bases TGCAGCTAAGGGAATGACCTAGGCTTTTGTGTGTGTCAATCTGTCGCAGGTCTCGCTATAGTGACTCAACGCAATCAGGC GACACGCGCAAGGAGACATC
Downstream 100 bases:
>100_bases GCAGGCGGATATCCGGATCAGAGGACGGAGGCTTCGGCCTCCGTTTTTGTTTGCGCGCGCGGTTGTGGTGGCGCGTGATC CGGCGCCAGCCGGCGGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MALVGTGHHFHFHAFDGISRKTRLTWLRNAAALTCLAALIATMWVGGNLSALMHTPILDGVSPLAAVVLLACSCMAISLL SLIAAGFFQFRMEQLDTLATA
Sequences:
>Translated_101_residues MALVGTGHHFHFHAFDGISRKTRLTWLRNAAALTCLAALIATMWVGGNLSALMHTPILDGVSPLAAVVLLACSCMAISLL SLIAAGFFQFRMEQLDTLATA >Mature_100_residues ALVGTGHHFHFHAFDGISRKTRLTWLRNAAALTCLAALIATMWVGGNLSALMHTPILDGVSPLAAVVLLACSCMAISLLS LIAAGFFQFRMEQLDTLATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10755; Mature: 10624
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVGTGHHFHFHAFDGISRKTRLTWLRNAAALTCLAALIATMWVGGNLSALMHTPILDG CCEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC VSPLAAVVLLACSCMAISLLSLIAAGFFQFRMEQLDTLATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALVGTGHHFHFHAFDGISRKTRLTWLRNAAALTCLAALIATMWVGGNLSALMHTPILDG CEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC VSPLAAVVLLACSCMAISLLSLIAAGFFQFRMEQLDTLATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA