Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 17544741

GI number: 17544741

Start: 26383

End: 28443

Strand: Direct

Name: cstA [H]

Synonym: RSc0022

Alternate gene names: 17544741

Gene position: 26383-28443 (Clockwise)

Preceding gene: 17544738

Following gene: 17544742

Centisome position: 0.71

GC content: 66.72

Gene sequence:

>2061_bases
ATGAGCTTTGTCAGGCAACACCTGATCTGGCTGGTTGTCGCCATTCTTGGCGCGTTTGCCTTTTCCACCGTCGCGCTTGC
GCGCGGGGAGGCGGTCAGCGCGCTGTGGGTGGTGGTGGCCGCCGTATGCATCTACCTGATCGCATACCGTTACTACAGCC
GCTACATCGCCGACAAGGTGCTCGGCCTGGACGGCACCCGCAAGACGCCGGCCTGGCGTCACAACGACGGGCTCGATTAC
GTTCCCACCAACAAGTACGTGCTGTTCGGCCACCACTTCGCGGCCATCGCCGGCGCCGGCCCGCTGGTCGGCCCCGTGCT
CGCCGCGCAGATGGGCTACCTGCCTGGCATGCTGTGGATCCTGGCCGGCGTCGTGTTCGCCGGCGCGGTGCAGGACTTCA
TCGTGCTGTTCATCTCCAGCCGCCGCGACGGCCGCTCGCTGGGCGACCTGGTGAAATCGGAAATGGGCACGGTGCCCGGC
CTGATCGCGCTGTTCGGGGCGTTCCTCATCATGATCATCATCCTCGCCGTGCTGGCGCTGATCGTGGTGAAGGCGCTGGC
CGGTTCGCCGTGGGGCACCTTCACGGTGGCGGCGACGATCCCGGTCGCCATCTTCATGGGCCTGTATGTGCGCTTCATCC
GCCCGGGCCGGGTCGGCGAGGTGTCCATCATCGGCTTCGTGCTGCTGATGCTCGCCATCATCGGCGGGCAGGCCGTGCAC
GAGAGCGCCACGCTGGCGCCGCTGTTCACATACGACGGCAAGGCGCTGACCTGGATGCTGATCGGCTACGGCTTCGTCGC
CTCGGTGCTGCCGGTGTGGCTGCTGCTGGCGCCGCGTGACTATCTGTCGACCTTCCTGAAGATCGGCACCATCATGGCGC
TGGCGATCGGCATCCTGATCGTCGCGCCGCAGATGCAGATGCCGTCGCTGACGCAGTTCGCGGCGGGCAACGGTCCGGTG
TGGTCGGGCAACCTGTTCCCGTTCCTGTTCATCACCATCGCGTGCGGCGCGGTGTCGGGCTTCCACTCGCTGATCTCGTC
GGGCACCACGCCCAAGATGCTGGAGAACGAACTCCAAGCGCGCTTCATCGGCTACGGCGCGATGCTGATGGAATCGTTCG
TCGCCATCATGGCGCTGGTGGCCGCCTCGGTCATCAACCCGGGCGTGTACTTTGCGATGAACGCGCCGGCCGCGCTGGTG
GGCACCACCGCCGACGCGGTGGCGCAGACGCTGTCGACATGGGGCTTCGTCGTCACGCCGGACGTGCTGCTGCAGACCGC
CAAGGACGTCGGCGAGAACACCATTCTGGCCCGTGCGGGCGGCGCGCCGACGTTGGCGGTCGGCATGGCGCACATCCTGC
ACCAGGTGGTGGGCGGCCAGGCCATGATGGCGTTCTGGTACCACTTCGCCATCCTGTTCGAGGCGCTGTTCATCCTGACC
GCCGTGGACGCGGGCACGCGTGCCGGCCGCTTCATGCTGCAGGATCTGCTGGGCACCTTCGTGCCGGCCCTCAAGCGCAC
CGAGTCGCTGACGGCCAACCTGATCGCCACGGCGGCGACCGTCGCGCTGTGGGGCTACTTCCTGTACCAGGGCGTGGTCG
ATCCGCTGGGCGGCATCAATACGCTTTGGCCGCTGTTCGGCATCTCCAACCAGATGCTGGCGGCGATCGCGCTGACGCTG
GGCACCTGCGTGCTGATCAAGATGAAGCGCGACCGCTACGTCTGGGTGACGCTGCTGCCGACCGCGTGGCTGCTGGTCTG
CACGCTGACGGCCGGCTGGCAGAAGCTGTTCCACCCGGATCCGAAGATCGGCTTCCTGTCGCACGCCAACAAGTTCGCCG
ACGCCATTGCCGCCGGCAAGCTGCTGGCTCCGGCCAAGTCGATGGCGCAGATGCAGCAGATCGTGCTGAACGATCGCATC
GATGCCTTCCTGTGCGGCCTGTTCGTGCTGGTGGTCGTCAGCATTGCCTGGTACGGCTTGCGCACCGTGCTGAAGGCGCG
CACCCAGGCTCGCCCGACGGTCAACGAAACGCCGTACGAAGCGCTGGGCGCCACGCACTGA

Upstream 100 bases:

>100_bases
ACCGGGGAACGGATTTCGCCTTGTGCCAGGCACGCCGGCCGGCAGGGGTGAACCAACACCCCGCATCCAGCAACTTCGAC
CAAGGTTCGAGGAGACCGAC

Downstream 100 bases:

>100_bases
CGCCCGCATCCGAGGGCGGCATGCCGCCCTCGCTCAAGGAGACACGACCATGCGCGAAGAGATCGAATCCCTCGGCCGGT
ACCTGGGCCAGGCGATGCGC

Product: carbon starvation A transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 685

Protein sequence:

>686_residues
MSFVRQHLIWLVVAILGAFAFSTVALARGEAVSALWVVVAAVCIYLIAYRYYSRYIADKVLGLDGTRKTPAWRHNDGLDY
VPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWILAGVVFAGAVQDFIVLFISSRRDGRSLGDLVKSEMGTVPG
LIALFGAFLIMIIILAVLALIVVKALAGSPWGTFTVAATIPVAIFMGLYVRFIRPGRVGEVSIIGFVLLMLAIIGGQAVH
ESATLAPLFTYDGKALTWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTIMALAIGILIVAPQMQMPSLTQFAAGNGPV
WSGNLFPFLFITIACGAVSGFHSLISSGTTPKMLENELQARFIGYGAMLMESFVAIMALVAASVINPGVYFAMNAPAALV
GTTADAVAQTLSTWGFVVTPDVLLQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGQAMMAFWYHFAILFEALFILT
AVDAGTRAGRFMLQDLLGTFVPALKRTESLTANLIATAATVALWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAIALTL
GTCVLIKMKRDRYVWVTLLPTAWLLVCTLTAGWQKLFHPDPKIGFLSHANKFADAIAAGKLLAPAKSMAQMQQIVLNDRI
DAFLCGLFVLVVVSIAWYGLRTVLKARTQARPTVNETPYEALGATH

Sequences:

>Translated_686_residues
MSFVRQHLIWLVVAILGAFAFSTVALARGEAVSALWVVVAAVCIYLIAYRYYSRYIADKVLGLDGTRKTPAWRHNDGLDY
VPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWILAGVVFAGAVQDFIVLFISSRRDGRSLGDLVKSEMGTVPG
LIALFGAFLIMIIILAVLALIVVKALAGSPWGTFTVAATIPVAIFMGLYVRFIRPGRVGEVSIIGFVLLMLAIIGGQAVH
ESATLAPLFTYDGKALTWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTIMALAIGILIVAPQMQMPSLTQFAAGNGPV
WSGNLFPFLFITIACGAVSGFHSLISSGTTPKMLENELQARFIGYGAMLMESFVAIMALVAASVINPGVYFAMNAPAALV
GTTADAVAQTLSTWGFVVTPDVLLQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGQAMMAFWYHFAILFEALFILT
AVDAGTRAGRFMLQDLLGTFVPALKRTESLTANLIATAATVALWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAIALTL
GTCVLIKMKRDRYVWVTLLPTAWLLVCTLTAGWQKLFHPDPKIGFLSHANKFADAIAAGKLLAPAKSMAQMQQIVLNDRI
DAFLCGLFVLVVVSIAWYGLRTVLKARTQARPTVNETPYEALGATH
>Mature_685_residues
SFVRQHLIWLVVAILGAFAFSTVALARGEAVSALWVVVAAVCIYLIAYRYYSRYIADKVLGLDGTRKTPAWRHNDGLDYV
PTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWILAGVVFAGAVQDFIVLFISSRRDGRSLGDLVKSEMGTVPGL
IALFGAFLIMIIILAVLALIVVKALAGSPWGTFTVAATIPVAIFMGLYVRFIRPGRVGEVSIIGFVLLMLAIIGGQAVHE
SATLAPLFTYDGKALTWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTIMALAIGILIVAPQMQMPSLTQFAAGNGPVW
SGNLFPFLFITIACGAVSGFHSLISSGTTPKMLENELQARFIGYGAMLMESFVAIMALVAASVINPGVYFAMNAPAALVG
TTADAVAQTLSTWGFVVTPDVLLQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGQAMMAFWYHFAILFEALFILTA
VDAGTRAGRFMLQDLLGTFVPALKRTESLTANLIATAATVALWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAIALTLG
TCVLIKMKRDRYVWVTLLPTAWLLVCTLTAGWQKLFHPDPKIGFLSHANKFADAIAAGKLLAPAKSMAQMQQIVLNDRID
AFLCGLFVLVVVSIAWYGLRTVLKARTQARPTVNETPYEALGATH

Specific function: Peptide utilization during carbon starvation [H]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=683, Percent_Identity=68.9604685212299, Blast_Score=947, Evalue=0.0,
Organism=Escherichia coli, GI87082431, Length=697, Percent_Identity=63.7015781922525, Blast_Score=883, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 73498; Mature: 73367

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVRQHLIWLVVAILGAFAFSTVALARGEAVSALWVVVAAVCIYLIAYRYYSRYIADKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDGTRKTPAWRHNDGLDYVPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWI
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LAGVVFAGAVQDFIVLFISSRRDGRSLGDLVKSEMGTVPGLIALFGAFLIMIIILAVLAL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IVVKALAGSPWGTFTVAATIPVAIFMGLYVRFIRPGRVGEVSIIGFVLLMLAIIGGQAVH
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH
ESATLAPLFTYDGKALTWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTIMALAIGILI
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VAPQMQMPSLTQFAAGNGPVWSGNLFPFLFITIACGAVSGFHSLISSGTTPKMLENELQA
HCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RFIGYGAMLMESFVAIMALVAASVINPGVYFAMNAPAALVGTTADAVAQTLSTWGFVVTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCEECH
DVLLQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGQAMMAFWYHFAILFEALFILT
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AVDAGTRAGRFMLQDLLGTFVPALKRTESLTANLIATAATVALWGYFLYQGVVDPLGGIN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TLWPLFGISNQMLAAIALTLGTCVLIKMKRDRYVWVTLLPTAWLLVCTLTAGWQKLFHPD
HHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PKIGFLSHANKFADAIAAGKLLAPAKSMAQMQQIVLNDRIDAFLCGLFVLVVVSIAWYGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVLKARTQARPTVNETPYEALGATH
HHHHHHHHHCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
SFVRQHLIWLVVAILGAFAFSTVALARGEAVSALWVVVAAVCIYLIAYRYYSRYIADKV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDGTRKTPAWRHNDGLDYVPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWI
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LAGVVFAGAVQDFIVLFISSRRDGRSLGDLVKSEMGTVPGLIALFGAFLIMIIILAVLAL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IVVKALAGSPWGTFTVAATIPVAIFMGLYVRFIRPGRVGEVSIIGFVLLMLAIIGGQAVH
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH
ESATLAPLFTYDGKALTWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTIMALAIGILI
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VAPQMQMPSLTQFAAGNGPVWSGNLFPFLFITIACGAVSGFHSLISSGTTPKMLENELQA
HCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RFIGYGAMLMESFVAIMALVAASVINPGVYFAMNAPAALVGTTADAVAQTLSTWGFVVTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCEECH
DVLLQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGQAMMAFWYHFAILFEALFILT
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AVDAGTRAGRFMLQDLLGTFVPALKRTESLTANLIATAATVALWGYFLYQGVVDPLGGIN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TLWPLFGISNQMLAAIALTLGTCVLIKMKRDRYVWVTLLPTAWLLVCTLTAGWQKLFHPD
HHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PKIGFLSHANKFADAIAAGKLLAPAKSMAQMQQIVLNDRIDAFLCGLFVLVVVSIAWYGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVLKARTQARPTVNETPYEALGATH
HHHHHHHHHCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848300; 9278503; 2521622 [H]