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The map label for this gene is yidD [C]

Identifier: 17544722

GI number: 17544722

Start: 1110

End: 1424

Strand: Direct

Name: yidD [C]

Synonym: RSc0003

Alternate gene names: 17544722

Gene position: 1110-1424 (Clockwise)

Preceding gene: 17545588

Following gene: 17544723

Centisome position: 0.03

GC content: 68.25

Gene sequence:

>315_bases
ATGACGCGCGTGCTGCTGTTCCTGCTGCGTGTCTACAAGGTGGCGTTCAGCCCCTTCGTCGGCGCGCAATGCCGTTTCCT
GCCGACCTGCTCCGACTACGCGCGCGACGCTGTGCTCACCCACGGGCCGGCGATCGGCAGCTACCTTGCGGCAAAACGCC
TGTGCCGCTGTCATCCGTTCGCGCAAGGCGGGTATGATCCTGTGCCGCCCGCCGCTGGCGACGCTGCGCTGCGCTCCACC
GATTCCGCATCGACCGAGACGACCGCAGCCGACGCACCGGCCGCGCGGCCGTCGATTCACCTTCCCAGACCGTAA

Upstream 100 bases:

>100_bases
AAGAGCTCTCGTACCTGTTCGAGATCGCGGCGCGCCCGCTGCCCGCGCCACCGGTGCCCTGCCCTGCCGCCGCGCCGGTT
CCCTCCGACGGAGCCGCGCC

Downstream 100 bases:

>100_bases
TCCGACATGGATATCAAACGCACCATTCTCTGGGTGATCTTCTCGCTGTCGGTTGTCCTGCTGTTCGACAACTGGCAACG
CGCGAACGGCCACCAGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTRVLLFLLRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPFAQGGYDPVPPAAGDAALRST
DSASTETTAADAPAARPSIHLPRP

Sequences:

>Translated_104_residues
MTRVLLFLLRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPFAQGGYDPVPPAAGDAALRST
DSASTETTAADAPAARPSIHLPRP
>Mature_103_residues
TRVLLFLLRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPFAQGGYDPVPPAAGDAALRSTD
SASTETTAADAPAARPSIHLPRP

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=74, Percent_Identity=48.6486486486487, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y003_RALSO (Q8Y3H7)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_518124.1
- GeneID:   1218805
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc0003
- NMPDR:   fig|267608.1.peg.3
- HOGENOM:   HBG634291
- OMA:   VAFSPFV
- ProtClustDB:   PRK00041
- BioCyc:   RSOL267608:RSC0003-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 11060; Mature: 10929

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLLFLLRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPF
CHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
AQGGYDPVPPAAGDAALRSTDSASTETTAADAPAARPSIHLPRP
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRVLLFLLRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPF
HHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
AQGGYDPVPPAAGDAALRSTDSASTETTAADAPAARPSIHLPRP
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852