Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17232772

Identifier: 17232772

GI number: 17232772

Start: 6298957

End: 6301269

Strand: Reverse

Name: 17232772

Synonym: all5280

Alternate gene names: NA

Gene position: 6301269-6298957 (Counterclockwise)

Preceding gene: 17232773

Following gene: 17232770

Centisome position: 98.25

GC content: 41.81

Gene sequence:

>2313_bases
ATGAGTAATCTTGGGATGTATGTTAAAGTTTTAGGGGTTGCAGTCAGTAGTTTAATAATTTTCTCTGTAAACTCTGCGAT
CGCCCAAATTACACAAGATAGTACTCTACCTGAAAATTCCAGAGTCACAAAACAAGAAAACAACATCATTATCGAAGGTG
GAACCTTATCTCCTGATAGACGTAATTTGTTCCATAGTTTTCGGGAGTTTTCTGTGCCAGAAAACTATACGGCTGAGTTT
AAAACAATCGGTAGTGTCCAAAACATCATTAGCCGAGTAACTGGTAGTTCTATTTCTAGCATTGATGGCATAATCAAATC
TGATAGCACAGCCAACCTGTTGCTGATCAATCCCAATGGAATTATTTTTGGTTCTAATGCTGCATTAAATATTCGCTCTT
CCTTTTTAGCAAGTACGGCAAATAGTCTGAATTTTGCCGATGGTACTCAATTTAGTACCATCAATCCTCAAAACACATTT
GTGCTAACAGTTAGCATTCCTAGTGGGTTACAATTTGGCGCAACGGCAAATCCTATTAAAAATCAATCTCAAGCACGGAA
TATAAGTGGTAGATCTGTTGGTCTTCAAGTCCCAAATGGTAATACGTTAGCCTTTGTGGGTGGCAACATCACACTAGAAG
GCGGCAACTTAACAGTACCATCAGGAAAAATTGAACTAGGAAGCGTTGCTCCCAATAGTCTAGTGATCCTTAATCCAATC
AACCAAGGTTGGTTAATAGGGTATCAAGGTGTGCAAGAATTTCGCAACATTCAATTGAGGATTCGCCAAGGGGCTAACGG
TAGACAGTTACCCTCTCAGATAGATACTACTGGTAATAATGGCGGTGAGATTCGTCTACAGGGTAACTCCGTAGAACTCA
GTGGTGAAAGTGTGCGCTTGAGAAGTATCACTACAGGTAATGCCAATGGTAAAGATATAACGATTAATGCAACAAAGCTA
ATTGTTCAGAATGGCGCACAGATAGCTACTTCTACCATCAGCCGGGGAGGCTCAGGAAATTTACTAATCAATGCCTTCGA
ATCTGTAGACATTATTGAGAGTGATACTTTGTCAAGTACAATTACTGGATTAATTGGCATCAGTGCAGGTCAAGGCAGAG
CAAGTGACATTAAAATCACTACTGGGAAGTTACGTATCCTTAATGGAGGCGTTGTAACAGCAGACTCTAGTGGATTTTTG
AGGACTAATGATTCACCTGTGATACCAGCTGAAGGAAAGGGCGGCAATATCATAGTCAACGCTTCGGAGTCAGTGGAGAT
AGCGGGAAATGTGAAAACACGTTTTTCTAGTGTCTTGTCTGCGGGGACGAGAAATGCTCAAAATGCAGGAACAGTTAATA
TAACTACAGGGAAATTAATTGTCCGCGACGGTGGGCAATTAAGTGTAAATGTGGGAGCATTCAACAATCCAGTTAACTCA
GGAACACCGGGAAAATTAAATATAACGGCTAAGTCTATATTGCTAGACAATCAAGGACAAATCACTTCTAATACTAGGTC
AGGTCAGGGTGGTGATATAAATTTGCTGGTGCAAGACTCGCTACAGATGCGCCGTAACAGTTTGATTTCCACTAGTGCAG
GCACGTCCAACGCTCCGGGAAATGGTGGTAATATCACAATCAATGCTCCTAATGGCTTTGTGTTTGCTGCTCCCTTAGGC
AATAATGATATTACGGCTAATGCCTTCTCTGGCATTGGTGGTAAAATCACCATCAACGCCAAGAAAATTTTTGGGTTTAT
ACAGCGCGATCGCTCAGACTTAGTAAGGTTATTAAACACTGAAGATCCAAATCTACTCAATCCCAACAAATTGCCAACCA
GCGACATTACAGCTTTTTCTCAGCAAAGCCCTTCATTCAATGGCATTGTACAAATTAATACGCCCGATGCTGACCCAAAT
AAAGGGTTAGTGGAATTGCCGAGCAATCTGATTAATGCTTCTGAGCAAATTGCTGCTAGTTGTAGTCCTCATCGAGGTTT
GCAAAGAAATTCGTTTGTTTCCACAGGACGAGGAGGAATTGCATCTAGCCCTACTGATACGCTGATTGATGATGCTGTGT
TGGTAGGTTGGACTGTGTTACCGACACAGATAAACGATAGTGCTGATAGGATTCCTGAACAGCACACACAGCAGGTTAAT
TTAAGCGCTTCTCCCCAAATTGTAGAAGCACAAGGCTGGCAAATAGATCGCAACGGTAATGTAGTACTAGTGGCGCAAGC
ACCTATTGTAATTCCTCACACCCCCACCCTACATTCGTCAGCTTGTGCTTTATTGGGGAGTAGGGGGGAATAA

Upstream 100 bases:

>100_bases
TTTATATTCGAGAAACATCCTCATAAGCCATAATTGATGTTGGTTCAAGGCCGCTATCAATTGTCAACCGGGATTGTTTC
TGTGGGGTGTAATAGCTGGT

Downstream 100 bases:

>100_bases
CAACTAACGACTGTACAGACGCGATTAATCGCGTCTCTAACAAATAGCTAATTCGTTTCTTGAATTTGCAAACGGACTGT
GTGTTCAGTTGCACCACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein

Number of amino acids: Translated: 770; Mature: 769

Protein sequence:

>770_residues
MSNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDRRNLFHSFREFSVPENYTAEF
KTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNGIIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTF
VLTVSIPSGLQFGATANPIKNQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI
NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRLRSITTGNANGKDITINATKL
IVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSSTITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFL
RTNDSPVIPAEGKGGNIIVNASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS
GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPGNGGNITINAPNGFVFAAPLG
NNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNTEDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPN
KGLVELPSNLINASEQIAASCSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN
LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE

Sequences:

>Translated_770_residues
MSNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDRRNLFHSFREFSVPENYTAEF
KTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNGIIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTF
VLTVSIPSGLQFGATANPIKNQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI
NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRLRSITTGNANGKDITINATKL
IVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSSTITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFL
RTNDSPVIPAEGKGGNIIVNASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS
GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPGNGGNITINAPNGFVFAAPLG
NNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNTEDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPN
KGLVELPSNLINASEQIAASCSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN
LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE
>Mature_769_residues
SNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDRRNLFHSFREFSVPENYTAEFK
TIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNGIIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTFV
LTVSIPSGLQFGATANPIKNQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPIN
QGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRLRSITTGNANGKDITINATKLI
VQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSSTITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFLR
TNDSPVIPAEGKGGNIIVNASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNSG
TPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPGNGGNITINAPNGFVFAAPLGN
NDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNTEDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPNK
GLVELPSNLINASEQIAASCSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVNL
SASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80418; Mature: 80287

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDR
CCCCHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCCHH
RNLFHSFREFSVPENYTAEFKTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCEEEEECCCE
IIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTFVLTVSIPSGLQFGATANPIK
EEECCCCEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
NQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI
CCHHHCCCCCCEEEEECCCCCEEEEECCEEEEECCEEECCCCCEEECCCCCCCEEEECCC
NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRL
CCCEEEEHHHHHHHCCEEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCEEEECCCEEEE
RSITTGNANGKDITINATKLIVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSST
EEEEECCCCCCEEEEEEEEEEEECCCEEEEHHHCCCCCCCEEEEECCCCEEECCCCHHHH
ITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFLRTNDSPVIPAEGKGGNIIVN
HHEEEEEECCCCCCCEEEEEECEEEEEECCEEEECCCCCEECCCCCEEECCCCCCEEEEE
ASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS
CCCCEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCEEEEEECCCCCCCCC
GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPG
CCCCEEEEEEEEEEECCCCCEECCCCCCCCCEEEEEECCHHHHHHHCEEEECCCCCCCCC
NGGNITINAPNGFVFAAPLGNNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNT
CCCEEEEECCCCEEEEEECCCCCEEEEHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHCC
EDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPNKGLVELPSNLINASEQIAAS
CCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHCCCHHHHHC
CSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCCHHHHCCCHHHHEEC
LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE
CCCCCCEEECCCEEEECCCCEEEEEECCEEECCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
SNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDR
CCCHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCCHH
RNLFHSFREFSVPENYTAEFKTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCEEEEECCCE
IIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTFVLTVSIPSGLQFGATANPIK
EEECCCCEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
NQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI
CCHHHCCCCCCEEEEECCCCCEEEEECCEEEEECCEEECCCCCEEECCCCCCCEEEECCC
NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRL
CCCEEEEHHHHHHHCCEEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCEEEECCCEEEE
RSITTGNANGKDITINATKLIVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSST
EEEEECCCCCCEEEEEEEEEEEECCCEEEEHHHCCCCCCCEEEEECCCCEEECCCCHHHH
ITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFLRTNDSPVIPAEGKGGNIIVN
HHEEEEEECCCCCCCEEEEEECEEEEEECCEEEECCCCCEECCCCCEEECCCCCCEEEEE
ASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS
CCCCEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCEEEEEECCCCCCCCC
GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPG
CCCCEEEEEEEEEEECCCCCEECCCCCCCCCEEEEEECCHHHHHHHCEEEECCCCCCCCC
NGGNITINAPNGFVFAAPLGNNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNT
CCCEEEEECCCCEEEEEECCCCCEEEEHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHCC
EDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPNKGLVELPSNLINASEQIAAS
CCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHCCCHHHHHC
CSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCCHHHHCCCHHHHEEC
LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE
CCCCCCEEECCCEEEECCCCEEEEEECCEEECCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA