| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232772
Identifier: 17232772
GI number: 17232772
Start: 6298957
End: 6301269
Strand: Reverse
Name: 17232772
Synonym: all5280
Alternate gene names: NA
Gene position: 6301269-6298957 (Counterclockwise)
Preceding gene: 17232773
Following gene: 17232770
Centisome position: 98.25
GC content: 41.81
Gene sequence:
>2313_bases ATGAGTAATCTTGGGATGTATGTTAAAGTTTTAGGGGTTGCAGTCAGTAGTTTAATAATTTTCTCTGTAAACTCTGCGAT CGCCCAAATTACACAAGATAGTACTCTACCTGAAAATTCCAGAGTCACAAAACAAGAAAACAACATCATTATCGAAGGTG GAACCTTATCTCCTGATAGACGTAATTTGTTCCATAGTTTTCGGGAGTTTTCTGTGCCAGAAAACTATACGGCTGAGTTT AAAACAATCGGTAGTGTCCAAAACATCATTAGCCGAGTAACTGGTAGTTCTATTTCTAGCATTGATGGCATAATCAAATC TGATAGCACAGCCAACCTGTTGCTGATCAATCCCAATGGAATTATTTTTGGTTCTAATGCTGCATTAAATATTCGCTCTT CCTTTTTAGCAAGTACGGCAAATAGTCTGAATTTTGCCGATGGTACTCAATTTAGTACCATCAATCCTCAAAACACATTT GTGCTAACAGTTAGCATTCCTAGTGGGTTACAATTTGGCGCAACGGCAAATCCTATTAAAAATCAATCTCAAGCACGGAA TATAAGTGGTAGATCTGTTGGTCTTCAAGTCCCAAATGGTAATACGTTAGCCTTTGTGGGTGGCAACATCACACTAGAAG GCGGCAACTTAACAGTACCATCAGGAAAAATTGAACTAGGAAGCGTTGCTCCCAATAGTCTAGTGATCCTTAATCCAATC AACCAAGGTTGGTTAATAGGGTATCAAGGTGTGCAAGAATTTCGCAACATTCAATTGAGGATTCGCCAAGGGGCTAACGG TAGACAGTTACCCTCTCAGATAGATACTACTGGTAATAATGGCGGTGAGATTCGTCTACAGGGTAACTCCGTAGAACTCA GTGGTGAAAGTGTGCGCTTGAGAAGTATCACTACAGGTAATGCCAATGGTAAAGATATAACGATTAATGCAACAAAGCTA ATTGTTCAGAATGGCGCACAGATAGCTACTTCTACCATCAGCCGGGGAGGCTCAGGAAATTTACTAATCAATGCCTTCGA ATCTGTAGACATTATTGAGAGTGATACTTTGTCAAGTACAATTACTGGATTAATTGGCATCAGTGCAGGTCAAGGCAGAG CAAGTGACATTAAAATCACTACTGGGAAGTTACGTATCCTTAATGGAGGCGTTGTAACAGCAGACTCTAGTGGATTTTTG AGGACTAATGATTCACCTGTGATACCAGCTGAAGGAAAGGGCGGCAATATCATAGTCAACGCTTCGGAGTCAGTGGAGAT AGCGGGAAATGTGAAAACACGTTTTTCTAGTGTCTTGTCTGCGGGGACGAGAAATGCTCAAAATGCAGGAACAGTTAATA TAACTACAGGGAAATTAATTGTCCGCGACGGTGGGCAATTAAGTGTAAATGTGGGAGCATTCAACAATCCAGTTAACTCA GGAACACCGGGAAAATTAAATATAACGGCTAAGTCTATATTGCTAGACAATCAAGGACAAATCACTTCTAATACTAGGTC AGGTCAGGGTGGTGATATAAATTTGCTGGTGCAAGACTCGCTACAGATGCGCCGTAACAGTTTGATTTCCACTAGTGCAG GCACGTCCAACGCTCCGGGAAATGGTGGTAATATCACAATCAATGCTCCTAATGGCTTTGTGTTTGCTGCTCCCTTAGGC AATAATGATATTACGGCTAATGCCTTCTCTGGCATTGGTGGTAAAATCACCATCAACGCCAAGAAAATTTTTGGGTTTAT ACAGCGCGATCGCTCAGACTTAGTAAGGTTATTAAACACTGAAGATCCAAATCTACTCAATCCCAACAAATTGCCAACCA GCGACATTACAGCTTTTTCTCAGCAAAGCCCTTCATTCAATGGCATTGTACAAATTAATACGCCCGATGCTGACCCAAAT AAAGGGTTAGTGGAATTGCCGAGCAATCTGATTAATGCTTCTGAGCAAATTGCTGCTAGTTGTAGTCCTCATCGAGGTTT GCAAAGAAATTCGTTTGTTTCCACAGGACGAGGAGGAATTGCATCTAGCCCTACTGATACGCTGATTGATGATGCTGTGT TGGTAGGTTGGACTGTGTTACCGACACAGATAAACGATAGTGCTGATAGGATTCCTGAACAGCACACACAGCAGGTTAAT TTAAGCGCTTCTCCCCAAATTGTAGAAGCACAAGGCTGGCAAATAGATCGCAACGGTAATGTAGTACTAGTGGCGCAAGC ACCTATTGTAATTCCTCACACCCCCACCCTACATTCGTCAGCTTGTGCTTTATTGGGGAGTAGGGGGGAATAA
Upstream 100 bases:
>100_bases TTTATATTCGAGAAACATCCTCATAAGCCATAATTGATGTTGGTTCAAGGCCGCTATCAATTGTCAACCGGGATTGTTTC TGTGGGGTGTAATAGCTGGT
Downstream 100 bases:
>100_bases CAACTAACGACTGTACAGACGCGATTAATCGCGTCTCTAACAAATAGCTAATTCGTTTCTTGAATTTGCAAACGGACTGT GTGTTCAGTTGCACCACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 770; Mature: 769
Protein sequence:
>770_residues MSNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDRRNLFHSFREFSVPENYTAEF KTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNGIIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTF VLTVSIPSGLQFGATANPIKNQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRLRSITTGNANGKDITINATKL IVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSSTITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFL RTNDSPVIPAEGKGGNIIVNASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPGNGGNITINAPNGFVFAAPLG NNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNTEDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPN KGLVELPSNLINASEQIAASCSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE
Sequences:
>Translated_770_residues MSNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDRRNLFHSFREFSVPENYTAEF KTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNGIIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTF VLTVSIPSGLQFGATANPIKNQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRLRSITTGNANGKDITINATKL IVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSSTITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFL RTNDSPVIPAEGKGGNIIVNASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPGNGGNITINAPNGFVFAAPLG NNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNTEDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPN KGLVELPSNLINASEQIAASCSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE >Mature_769_residues SNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDRRNLFHSFREFSVPENYTAEFK TIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNGIIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTFV LTVSIPSGLQFGATANPIKNQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPIN QGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRLRSITTGNANGKDITINATKLI VQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSSTITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFLR TNDSPVIPAEGKGGNIIVNASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNSG TPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPGNGGNITINAPNGFVFAAPLGN NDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNTEDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPNK GLVELPSNLINASEQIAASCSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVNL SASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80418; Mature: 80287
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDR CCCCHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCCHH RNLFHSFREFSVPENYTAEFKTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCEEEEECCCE IIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTFVLTVSIPSGLQFGATANPIK EEECCCCEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC NQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI CCHHHCCCCCCEEEEECCCCCEEEEECCEEEEECCEEECCCCCEEECCCCCCCEEEECCC NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRL CCCEEEEHHHHHHHCCEEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCEEEECCCEEEE RSITTGNANGKDITINATKLIVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSST EEEEECCCCCCEEEEEEEEEEEECCCEEEEHHHCCCCCCCEEEEECCCCEEECCCCHHHH ITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFLRTNDSPVIPAEGKGGNIIVN HHEEEEEECCCCCCCEEEEEECEEEEEECCEEEECCCCCEECCCCCEEECCCCCCEEEEE ASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS CCCCEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCEEEEEECCCCCCCCC GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPG CCCCEEEEEEEEEEECCCCCEECCCCCCCCCEEEEEECCHHHHHHHCEEEECCCCCCCCC NGGNITINAPNGFVFAAPLGNNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNT CCCEEEEECCCCEEEEEECCCCCEEEEHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHCC EDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPNKGLVELPSNLINASEQIAAS CCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHCCCHHHHHC CSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCCHHHHCCCHHHHEEC LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE CCCCCCEEECCCEEEECCCCEEEEEECCEEECCCCCCCCCHHHHHCCCCC >Mature Secondary Structure SNLGMYVKVLGVAVSSLIIFSVNSAIAQITQDSTLPENSRVTKQENNIIIEGGTLSPDR CCCHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCCHH RNLFHSFREFSVPENYTAEFKTIGSVQNIISRVTGSSISSIDGIIKSDSTANLLLINPNG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCEEEEECCCE IIFGSNAALNIRSSFLASTANSLNFADGTQFSTINPQNTFVLTVSIPSGLQFGATANPIK EEECCCCEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC NQSQARNISGRSVGLQVPNGNTLAFVGGNITLEGGNLTVPSGKIELGSVAPNSLVILNPI CCHHHCCCCCCEEEEECCCCCEEEEECCEEEEECCEEECCCCCEEECCCCCCCEEEECCC NQGWLIGYQGVQEFRNIQLRIRQGANGRQLPSQIDTTGNNGGEIRLQGNSVELSGESVRL CCCEEEEHHHHHHHCCEEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCEEEECCCEEEE RSITTGNANGKDITINATKLIVQNGAQIATSTISRGGSGNLLINAFESVDIIESDTLSST EEEEECCCCCCEEEEEEEEEEEECCCEEEEHHHCCCCCCCEEEEECCCCEEECCCCHHHH ITGLIGISAGQGRASDIKITTGKLRILNGGVVTADSSGFLRTNDSPVIPAEGKGGNIIVN HHEEEEEECCCCCCCEEEEEECEEEEEECCEEEECCCCCEECCCCCEEECCCCCCEEEEE ASESVEIAGNVKTRFSSVLSAGTRNAQNAGTVNITTGKLIVRDGGQLSVNVGAFNNPVNS CCCCEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCEEEEEECCCCCCCCC GTPGKLNITAKSILLDNQGQITSNTRSGQGGDINLLVQDSLQMRRNSLISTSAGTSNAPG CCCCEEEEEEEEEEECCCCCEECCCCCCCCCEEEEEECCHHHHHHHCEEEECCCCCCCCC NGGNITINAPNGFVFAAPLGNNDITANAFSGIGGKITINAKKIFGFIQRDRSDLVRLLNT CCCEEEEECCCCEEEEEECCCCCEEEEHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHCC EDPNLLNPNKLPTSDITAFSQQSPSFNGIVQINTPDADPNKGLVELPSNLINASEQIAAS CCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHCCCHHHHHC CSPHRGLQRNSFVSTGRGGIASSPTDTLIDDAVLVGWTVLPTQINDSADRIPEQHTQQVN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCCHHHHCCCHHHHEEC LSASPQIVEAQGWQIDRNGNVVLVAQAPIVIPHTPTLHSSACALLGSRGE CCCCCCEEECCCEEEECCCCEEEEEECCEEECCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA