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The map label for this gene is 17232768

Identifier: 17232768

GI number: 17232768

Start: 6295931

End: 6296257

Strand: Reverse

Name: 17232768

Synonym: all5276

Alternate gene names: NA

Gene position: 6296257-6295931 (Counterclockwise)

Preceding gene: 17232769

Following gene: 17232766

Centisome position: 98.17

GC content: 36.39

Gene sequence:

>327_bases
GTGACAATGAAATATAAAGGATATGAAGCCATTGTCGAATTTGATGATGAAGCTGAAATTTTTCATGGGGAAGTAATTAA
CCTTCGAGATGTGATTACATTTCAGGGTGACAGCGTCAAAGAGCTAAAGCAAGCTTTTCATGATTCAGTAGACGATTATT
TAGAATTTTGTCAAGAACGTGGCGAAGAACCTGAAAAACCCTTTTCAGGAAAACTCATGCTCAGAATTAACCCTGAATTA
CATAAAATCATCGCCATCAAAGCGAAGAAAGAGGGACAAAGCCTTAATTCTTGGATAGAAAAATGCTTGTGTATGTATGT
TCCTTAG

Upstream 100 bases:

>100_bases
CCACACCCGGAAAAAGAAACCGATAAAGGTGCTGTTAAGTCTATGCGGCGCTTCTTAACAGAGTCTGGGGTTCAAGAGGA
CTTGGAGACGGGAGGACTTA

Downstream 100 bases:

>100_bases
GTTAATCCAGTATTATCCAGGTTTTCTTGAGTGACTGTACGAGTGGACTTAACTTGATAAAAAAGTGACTCTAATATTTA
GAGTCACTAATAAATTAAAT

Product: HicB protein

Products: NA

Alternate protein names: HicB Protein; HicB-Related Protein; Xin-Antitoxin System Antitoxin Component HicB Family; Hif-Contiguous Protein B; Addiction Module HicB-Related Protein; Xin-Antitoxin System Protein HicB; HicB Family; HicB-Like Protein; Pilus Related Protein HicB

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTMKYKGYEAIVEFDDEAEIFHGEVINLRDVITFQGDSVKELKQAFHDSVDDYLEFCQERGEEPEKPFSGKLMLRINPEL
HKIIAIKAKKEGQSLNSWIEKCLCMYVP

Sequences:

>Translated_108_residues
MTMKYKGYEAIVEFDDEAEIFHGEVINLRDVITFQGDSVKELKQAFHDSVDDYLEFCQERGEEPEKPFSGKLMLRINPEL
HKIIAIKAKKEGQSLNSWIEKCLCMYVP
>Mature_107_residues
TMKYKGYEAIVEFDDEAEIFHGEVINLRDVITFQGDSVKELKQAFHDSVDDYLEFCQERGEEPEKPFSGKLMLRINPELH
KIIAIKAKKEGQSLNSWIEKCLCMYVP

Specific function: Unknown

COG id: COG4226

COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12575; Mature: 12443

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKYKGYEAIVEFDDEAEIFHGEVINLRDVITFQGDSVKELKQAFHDSVDDYLEFCQER
CCCCCCCCEEEEEECCCCCEECCCEECCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHH
GEEPEKPFSGKLMLRINPELHKIIAIKAKKEGQSLNSWIEKCLCMYVP
CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMKYKGYEAIVEFDDEAEIFHGEVINLRDVITFQGDSVKELKQAFHDSVDDYLEFCQER
CCCCCCCEEEEEECCCCCEECCCEECCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHH
GEEPEKPFSGKLMLRINPELHKIIAIKAKKEGQSLNSWIEKCLCMYVP
CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA