| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17232742
Identifier: 17232742
GI number: 17232742
Start: 6264560
End: 6265645
Strand: Reverse
Name: 17232742
Synonym: all5250
Alternate gene names: NA
Gene position: 6265645-6264560 (Counterclockwise)
Preceding gene: 17232747
Following gene: 17232740
Centisome position: 97.69
GC content: 42.27
Gene sequence:
>1086_bases ATGACTGAATTACCACCAAACGCTCCTAATCCTGAGAATGCTACCAATGAATTGGCGCAAGAATTGTTACGAAAATTAAG ACAAAAACAAGGTAATTGGGTGGAATGGGGTCAGGCGATCGCCTCTCTACAAAAATCTGGTTACAATCCTCAAGATATTT TTGAAGCAACTGGATTTGAACCAGTACAACAAAATCAGGTAATTGTTGGCTCTCAAGTTTATAATTCTTTAGAAAAATCA GGCGCATCAGCAGCTACACTGGCGCACTATGCTACACGTGGAAGTGATGTTTTATATGAACTACGTTTGCTCACCCATGA AGAACGAGCGGCGGCGGGTGATTTGACGTTTACTCATAAAGTCGATGCAGATGAAGCGCGGGAAATAGCCAAAGCGATTA AAGATTTCTCTCGTTTCCGCATTTTACCAGAAGGATTCTCTAACCATCCTGGGGATGCAGTCGCCTATCAAGCTTGGAAA TTAGCACGGCAATATTCAGATTTGCAAGAGCGATCGCGTCTTATTGCTAGAGGGTTACGTTTTGCTCACAGCGAAACAGC TAGGAAACAAATCGAGCAATTACTAGTAGATTTTACGGTTGTTTCCCAGCGTCCGGCTCCTATTCCGCCCTTTTTCCGCT TCGATACAGAAGATGAATTACCACGGATTGTTCCTGTAGTAGGTCAGTTACCTTTAAAAGCCGAAGAACTCAAAGCTGTT CCCTTAGTTGAGGAAATTGAGCCATTTCGCTTAGTGAAATTTTCTGGTGAACAAGCTTGGGTGGCTTTACCTGGTTGGCA AGTTTTATTAGCAGCAGAAGACCCAGTAACGATTTTAGCAACGAGCGATCGCTTTCCTAAACAGAATCAAACTGAGCCTG GGCCTGTATTAGTAGTGGTAGATCGTTCTCAACGAGAATGGAATGATTTTAGTTATTTCGTCGTAGATCACGACGGCGAA TTAGATTTTCAGTGGTTTGAAACTAAACCAGAGTTTCCCATATTGGGAAAAGTGATTATTCTGGTTCGTCCTCGGAGAAT TTTAGATGAAAACGTAACTAAAGACTCTTGGCAAATTGACGAGTAA
Upstream 100 bases:
>100_bases TTTAAATTGTGTCCTATTCAAAATTTATAATCTCAGCACTGCTACCATTTATTCTCTACGAAACGCTACAAAAACATTTT GTTGAATCTTGAATTGCAAT
Downstream 100 bases:
>100_bases TGCAGGTGACAACGTAGCCGTTCTGAATTTCATCGAGACACAAAAATTTTTGCTCACTTTGATCAACGTCACGCCTAATA AGTTTGGCAACACAACCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTELPPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFEPVQQNQVIVGSQVYNSLEKS GASAATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHKVDADEAREIAKAIKDFSRFRILPEGFSNHPGDAVAYQAWK LARQYSDLQERSRLIARGLRFAHSETARKQIEQLLVDFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQLPLKAEELKAV PLVEEIEPFRLVKFSGEQAWVALPGWQVLLAAEDPVTILATSDRFPKQNQTEPGPVLVVVDRSQREWNDFSYFVVDHDGE LDFQWFETKPEFPILGKVIILVRPRRILDENVTKDSWQIDE
Sequences:
>Translated_361_residues MTELPPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFEPVQQNQVIVGSQVYNSLEKS GASAATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHKVDADEAREIAKAIKDFSRFRILPEGFSNHPGDAVAYQAWK LARQYSDLQERSRLIARGLRFAHSETARKQIEQLLVDFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQLPLKAEELKAV PLVEEIEPFRLVKFSGEQAWVALPGWQVLLAAEDPVTILATSDRFPKQNQTEPGPVLVVVDRSQREWNDFSYFVVDHDGE LDFQWFETKPEFPILGKVIILVRPRRILDENVTKDSWQIDE >Mature_360_residues TELPPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFEPVQQNQVIVGSQVYNSLEKSG ASAATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHKVDADEAREIAKAIKDFSRFRILPEGFSNHPGDAVAYQAWKL ARQYSDLQERSRLIARGLRFAHSETARKQIEQLLVDFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQLPLKAEELKAVP LVEEIEPFRLVKFSGEQAWVALPGWQVLLAAEDPVTILATSDRFPKQNQTEPGPVLVVVDRSQREWNDFSYFVVDHDGEL DFQWFETKPEFPILGKVIILVRPRRILDENVTKDSWQIDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41010; Mature: 40878
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELPPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC PVQQNQVIVGSQVYNSLEKSGASAATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHK CCCCCCEEECHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEE VDADEAREIAKAIKDFSRFRILPEGFSNHPGDAVAYQAWKLARQYSDLQERSRLIARGLR CCHHHHHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHSETARKQIEQLLVDFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQLPLKAEELKAV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCHHHHHCC PLVEEIEPFRLVKFSGEQAWVALPGWQVLLAAEDPVTILATSDRFPKQNQTEPGPVLVVV CCHHHCCCEEEEEECCCEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEE DRSQREWNDFSYFVVDHDGELDFQWFETKPEFPILGKVIILVRPRRILDENVTKDSWQID ECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCC E C >Mature Secondary Structure TELPPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFE CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC PVQQNQVIVGSQVYNSLEKSGASAATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHK CCCCCCEEECHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEE VDADEAREIAKAIKDFSRFRILPEGFSNHPGDAVAYQAWKLARQYSDLQERSRLIARGLR CCHHHHHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHSETARKQIEQLLVDFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQLPLKAEELKAV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCHHHHHCC PLVEEIEPFRLVKFSGEQAWVALPGWQVLLAAEDPVTILATSDRFPKQNQTEPGPVLVVV CCHHHCCCEEEEEECCCEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEE DRSQREWNDFSYFVVDHDGELDFQWFETKPEFPILGKVIILVRPRRILDENVTKDSWQID ECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA