| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232663
Identifier: 17232663
GI number: 17232663
Start: 6167904
End: 6168341
Strand: Reverse
Name: 17232663
Synonym: all5171
Alternate gene names: NA
Gene position: 6168341-6167904 (Counterclockwise)
Preceding gene: 17232664
Following gene: 17232662
Centisome position: 96.17
GC content: 31.96
Gene sequence:
>438_bases ATGAAAGATTTAGAATTATTCCAATTTCATCTCGATAGAGCAATTTATATTTTAAGGTTTCAGGATAAAAAGCTAATTGA AACTTGGGTAACTGAATTAGATCAGCATTTAGCACCGGAATATATAGAATCATGTCTCACAGCAGCGATATTAGAATTAT CAATATCTCATTCTCAAACATTTCACTGGATTTTAGATCATTTAGCTGATTGGAGACCTTATAAGCAATTACTAGAATCA GTAACTAGATTTGCTTTAAAAAAACTTGTCCAAAAAGGTTTTATGCCTGGTGGAGAATTTAGTTTTACTGCTGATGGCAA AATATTATTGACTGAAAATGCCAAAGCAACAATTATGAAAGATACTGCGAAAACTGACCGTCTCTTGCTAGAAAAAATAC TCTTAACTCCCCAACAAATTCACTCACTCACAATATGA
Upstream 100 bases:
>100_bases TACCTATTACTTAGATTGGAACTTGGACATTAAATGCCAGCAATTATTTCCCACCGATAAAATAATTTAATTAATCGTTT TTTATTACCATTTAAAAAAA
Downstream 100 bases:
>100_bases TGTCTAGTATCACATTCAGTTTCGTCTTTGTTGTAAATCTCCTACTACAACCAATCCGTCAATGGCTGGAATCTCTAAAA ATCAAAAATCACCGATTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKDLELFQFHLDRAIYILRFQDKKLIETWVTELDQHLAPEYIESCLTAAILELSISHSQTFHWILDHLADWRPYKQLLES VTRFALKKLVQKGFMPGGEFSFTADGKILLTENAKATIMKDTAKTDRLLLEKILLTPQQIHSLTI
Sequences:
>Translated_145_residues MKDLELFQFHLDRAIYILRFQDKKLIETWVTELDQHLAPEYIESCLTAAILELSISHSQTFHWILDHLADWRPYKQLLES VTRFALKKLVQKGFMPGGEFSFTADGKILLTENAKATIMKDTAKTDRLLLEKILLTPQQIHSLTI >Mature_145_residues MKDLELFQFHLDRAIYILRFQDKKLIETWVTELDQHLAPEYIESCLTAAILELSISHSQTFHWILDHLADWRPYKQLLES VTRFALKKLVQKGFMPGGEFSFTADGKILLTENAKATIMKDTAKTDRLLLEKILLTPQQIHSLTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16870; Mature: 16870
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLELFQFHLDRAIYILRFQDKKLIETWVTELDQHLAPEYIESCLTAAILELSISHSQT CCCHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH FHWILDHLADWRPYKQLLESVTRFALKKLVQKGFMPGGEFSFTADGKILLTENAKATIMK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCEEEEH DTAKTDRLLLEKILLTPQQIHSLTI HHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MKDLELFQFHLDRAIYILRFQDKKLIETWVTELDQHLAPEYIESCLTAAILELSISHSQT CCCHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH FHWILDHLADWRPYKQLLESVTRFALKKLVQKGFMPGGEFSFTADGKILLTENAKATIMK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCEEEEH DTAKTDRLLLEKILLTPQQIHSLTI HHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA