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The map label for this gene is 17232538

Identifier: 17232538

GI number: 17232538

Start: 6019997

End: 6020401

Strand: Reverse

Name: 17232538

Synonym: all5046

Alternate gene names: NA

Gene position: 6020401-6019997 (Counterclockwise)

Preceding gene: 17232539

Following gene: 17232536

Centisome position: 93.87

GC content: 42.72

Gene sequence:

>405_bases
ATGCGTCTACAAGATGAGCCAGATATTCCAGCACAGATCAACATCGTACCGATGATTGATGTGATTTTTGCGATTTTGAC
ATTTTTTATCATGTCTACGCTGTTTTTAACTCGTTCAGAAGGTTTGCCAGTTAATTTACCAAAAGCGGCAACGGCAAAAC
AACAGCAAGTACCTGCAAAGATTACGATCACGGTAGACGAACAAGGCGTGGTCAGCTTGAATCGTCAACCGATTCTAGTT
GATGCTGTGGCTGGACAGTTGCGTAACCTAGTTGGTACTAACCAGGAAGCCCTAGTAGTTATTAATGCTGATGAAAAAGT
AGGACACGGTAAGGTAGTGGCAATCATGGATCAAGTACGTCAGGTACAAGGAGCAAAATTAGCGATCGCCACTCAAAAAC
GTTAA

Upstream 100 bases:

>100_bases
TTTCGGGGACTTTACACCAGACAGATGGCACTATTTCAAGAGTATGGCGGTCAATTAGAATTACTTTATCGCCGCCGCTA
TGAACGAGGAGAGAGAACCT

Downstream 100 bases:

>100_bases
GGCTAATTAATAATTCGTAATTCGTAATTAAAAGTAAGTAAGGGGTAAGCTAAACAGCTTTACCCTTCAACTTCTCTATT
TAAAATTGATATTATCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRLQDEPDIPAQINIVPMIDVIFAILTFFIMSTLFLTRSEGLPVNLPKAATAKQQQVPAKITITVDEQGVVSLNRQPILV
DAVAGQLRNLVGTNQEALVVINADEKVGHGKVVAIMDQVRQVQGAKLAIATQKR

Sequences:

>Translated_134_residues
MRLQDEPDIPAQINIVPMIDVIFAILTFFIMSTLFLTRSEGLPVNLPKAATAKQQQVPAKITITVDEQGVVSLNRQPILV
DAVAGQLRNLVGTNQEALVVINADEKVGHGKVVAIMDQVRQVQGAKLAIATQKR
>Mature_134_residues
MRLQDEPDIPAQINIVPMIDVIFAILTFFIMSTLFLTRSEGLPVNLPKAATAKQQQVPAKITITVDEQGVVSLNRQPILV
DAVAGQLRNLVGTNQEALVVINADEKVGHGKVVAIMDQVRQVQGAKLAIATQKR

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 14563; Mature: 14563

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQDEPDIPAQINIVPMIDVIFAILTFFIMSTLFLTRSEGLPVNLPKAATAKQQQVPAK
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHCCCEE
ITITVDEQGVVSLNRQPILVDAVAGQLRNLVGTNQEALVVINADEKVGHGKVVAIMDQVR
EEEEECCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH
QVQGAKLAIATQKR
HHCCCEEEEEECCC
>Mature Secondary Structure
MRLQDEPDIPAQINIVPMIDVIFAILTFFIMSTLFLTRSEGLPVNLPKAATAKQQQVPAK
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHCCCEE
ITITVDEQGVVSLNRQPILVDAVAGQLRNLVGTNQEALVVINADEKVGHGKVVAIMDQVR
EEEEECCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH
QVQGAKLAIATQKR
HHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]