| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17232525
Identifier: 17232525
GI number: 17232525
Start: 6004332
End: 6004484
Strand: Reverse
Name: 17232525
Synonym: asl5033
Alternate gene names: NA
Gene position: 6004484-6004332 (Counterclockwise)
Preceding gene: 17232528
Following gene: 17232521
Centisome position: 93.62
GC content: 39.22
Gene sequence:
>153_bases GTGAATGAGGATAGGATAGGTTTCACTCATAAGTTTCCTTGTGGCAGAATGCAGGGGGCGGGGGAAGATGAATCAATTCA AAATACCCTACGGGAAGCTAAAGCTACAGAATTAAAGAGTAGGGAGAGAACAAAAATTAAGTTTTTTAATTAG
Upstream 100 bases:
>100_bases CTCCTTCCAAAATAATATGTCCACCCGATAATAGCCCTACCAGTAGCTGTTGTATTAGCTGAGATTGTCCGACAATAACG TGGTTCAGTTTTTCACCCAG
Downstream 100 bases:
>100_bases TACTTACTACTCTTTAATGAATATGTTGTGGTTAATTTACCTCATCAAACTCAGAATGGCTACATTATTTGTTTCCGCCA AGCATAAAGAAGTATTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MNEDRIGFTHKFPCGRMQGAGEDESIQNTLREAKATELKSRERTKIKFFN
Sequences:
>Translated_50_residues MNEDRIGFTHKFPCGRMQGAGEDESIQNTLREAKATELKSRERTKIKFFN >Mature_50_residues MNEDRIGFTHKFPCGRMQGAGEDESIQNTLREAKATELKSRERTKIKFFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5818; Mature: 5818
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEDRIGFTHKFPCGRMQGAGEDESIQNTLREAKATELKSRERTKIKFFN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MNEDRIGFTHKFPCGRMQGAGEDESIQNTLREAKATELKSRERTKIKFFN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA