| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232505
Identifier: 17232505
GI number: 17232505
Start: 5985728
End: 5986171
Strand: Reverse
Name: 17232505
Synonym: all5013
Alternate gene names: NA
Gene position: 5986171-5985728 (Counterclockwise)
Preceding gene: 17232506
Following gene: 17232504
Centisome position: 93.33
GC content: 41.67
Gene sequence:
>444_bases ATGTCCATCCGCGAAGAAATGCCCGTACTTGCCCGCCATGCAGGTGAATGGACGGGTACATATACATTAATTGATACTTC AGGGAAAATCCTCGACCACCATCAATCGCACTTAAGTTGCCAACTTCCCGAAGATGGCCCCTATCCCTACTACCAAGTGA ATCGCTATACTTGGGCTGATGGAAAAGAAGAAGTGCATAATTTTCCAGGGACATATCAAGATAAGATACTGTGGTTTGAT AGCGATCGCATTCAAGGTAAAGCTTGGGAAATAGATGACTCTACGGTTATCCTGTGGTTTTCCTATAAGACAGCCCCAGG AATGTATTTGTATGAAATGATTCAAATCAGCCCTGATAATAACCATCGTGCTAGAACTTGGCACTGGTTTAAAAATGATC AAATATATCAACGTACTCTGATTCAAGAAGAACGGCTAAAATAA
Upstream 100 bases:
>100_bases CGAATATCAAACCGAGTCGGATAGCTTGGTAGGCTGCAAAGTCGAACAGTTATCCGATTCATGTAAAAGTTAAACAACCA TACCCCCCTACTCCCAAACC
Downstream 100 bases:
>100_bases TAATTCCCCATATTTCAGAAAGTTATGCTTTTATCTATTGGAATACAACTTTCTGAAAAAATAAAATGGTAGGGGTGCAA ACTTTTGCGCCCCTATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSIREEMPVLARHAGEWTGTYTLIDTSGKILDHHQSHLSCQLPEDGPYPYYQVNRYTWADGKEEVHNFPGTYQDKILWFD SDRIQGKAWEIDDSTVILWFSYKTAPGMYLYEMIQISPDNNHRARTWHWFKNDQIYQRTLIQEERLK
Sequences:
>Translated_147_residues MSIREEMPVLARHAGEWTGTYTLIDTSGKILDHHQSHLSCQLPEDGPYPYYQVNRYTWADGKEEVHNFPGTYQDKILWFD SDRIQGKAWEIDDSTVILWFSYKTAPGMYLYEMIQISPDNNHRARTWHWFKNDQIYQRTLIQEERLK >Mature_146_residues SIREEMPVLARHAGEWTGTYTLIDTSGKILDHHQSHLSCQLPEDGPYPYYQVNRYTWADGKEEVHNFPGTYQDKILWFDS DRIQGKAWEIDDSTVILWFSYKTAPGMYLYEMIQISPDNNHRARTWHWFKNDQIYQRTLIQEERLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17601; Mature: 17470
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIREEMPVLARHAGEWTGTYTLIDTSGKILDHHQSHLSCQLPEDGPYPYYQVNRYTWAD CCCHHHCCHHHHCCCCCCEEEEEEECCCCEECCCCCCEEEECCCCCCCCCEEEEEEECCC GKEEVHNFPGTYQDKILWFDSDRIQGKAWEIDDSTVILWFSYKTAPGMYLYEMIQISPDN CHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCC NHRARTWHWFKNDQIYQRTLIQEERLK CCCCEEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure SIREEMPVLARHAGEWTGTYTLIDTSGKILDHHQSHLSCQLPEDGPYPYYQVNRYTWAD CCHHHCCHHHHCCCCCCEEEEEEECCCCEECCCCCCEEEECCCCCCCCCEEEEEEECCC GKEEVHNFPGTYQDKILWFDSDRIQGKAWEIDDSTVILWFSYKTAPGMYLYEMIQISPDN CHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCC NHRARTWHWFKNDQIYQRTLIQEERLK CCCCEEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA