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The map label for this gene is 17232473

Identifier: 17232473

GI number: 17232473

Start: 5950197

End: 5952137

Strand: Reverse

Name: 17232473

Synonym: all4981

Alternate gene names: NA

Gene position: 5952137-5950197 (Counterclockwise)

Preceding gene: 17232474

Following gene: 17232472

Centisome position: 92.8

GC content: 46.78

Gene sequence:

>1941_bases
ATGAATAGTGAGTTGTTCCAGAAGCTAGCAAAAGCACAAACTGACGAAGAACGCTCTTGGATTGTCACAGAGAGTTTATT
GGCAACTCTATCACCTGAATTAGCTGCGGCTGCATGGGCGGCGGTTGTGCCACATTGGTTTAACGCAGAAATTTTGGCAG
CGCTGCGCCCAGAATTGCAAGCACAATCATCTCAACTTTATACAAAATTGCAAGCCTTATCTTTTGTAGAGGAGTTTGCT
GATAGAGGACATGATGTTCACGATTTAACACGGAATCTGATGTTAAAACATCTGTGGCAAGAACATCAAGATGAATTTAT
TACCTTGTCGCAACGGGCAGCAGAGTATTTTGGTAGGAACAATCAACAGCCAGAAACTCAAATTGAATGGCTGTATCACT
TGATTGTAGTTGATCGGGAGTGGAAAGGCAGTGAGTTTTGGAATTTAGCACAAAACTGGGACAATAGCTTTCGTGTTGCT
GAACTAGAATCGCTGATTGCGGCATTATTAGAACAAATTGCCGCAGAACGCGTAGAAACTCTAGCCAAAGCAGAGGTTTA
TTATTGGGCAGGTAAAGCAAAATTTCGAGTTTATAAAGCAAAAGAAGCGTTAGAAAGGTACGAGGAGGCATTGGCATTCT
ACCGCAACATCGGCGTTAGCGAAGCTCCTCCTGTGGAGGCTCGCTTGGGGGAAGCTAATACTTTACAAGCCATTGGCGAT
GTCTTGCAGTTCCTTGACCGACGCACCGAAGCGTTAGAAAGGTACGAGGAGGCATTGGCATTCTACCGCGACATCGGCGA
TCGCTTGGGGGAAGCTAATACTTTAAGAGCCATTGGCGATGTCTTGCAGTTCCTTGACCGACGCACCGAAGCGTTAGAAA
GGTACGAGGAGGCATTGGCATTCTACCGCGATATCGGCGCTCGCTTGGGGGAAGCTAATACTTTACAAGCCATTGGCGAT
GTCTTGCAGTTCCTCAAACGTAGCACCGAAGCGTTAGAAAGGTACGAGGAGGCATTGGCATTCTACCGCGACATCGGCGA
TCGCTTGGGGGAAGCTAATACTTTAAGAGCCATTGGCGATGTCTTGCAGTTCCTTGACCGACGCACCGAAGCGTTAGAAA
GGTACGAGGAGGCATTGGCATTCTACCGCGACATCGGCGCTCGCTTGGGGGAAGCTAATACATTAAAAGCCATTGGCGAT
GTCTTGCAGTTCCTCAAACGTAGCACCGAAGCGTTAGAAAGGTACGAGGAGGCATTGGCATTCTACCGCGACATCGGCGC
TCGCTTGGGGGAAGCTAATACATTAAGAGCCATTGGCGATGTCTTGCAGTTCCTTGACCGACGCACCGAAGCGTTAGAAA
GGTACGAGGAGGCATTGGCATTCTACCGCGACATCGGCGATCGCTTGGGGGAAGCTAATACATTAAGAGCCATTGGCGAT
GTCTTGCAGTTCCTCAAACGTAGCACTGAAGCGTTAGAAAGGTACGAGGAGGCATTGGCATTCTACCGCGACATCGGCGA
TCGCTTGGGGGAAGCTAATACATTAAGAGCCATTGGCGATGTCTTGCAGTTCCTCAAACGTAGCACTGAAGCGTTAGAAA
GGTACGAGGAGGCATTGGCATTCTACCGCGACATCGGCGATCGCTTGGGGGAAGCTAATACTTTACAAGCCATTGGCATC
TTGCAAGATGATTTAACCGTGGGTTTAGAATATTGTCAGGCGGCTTTAGAACTCTATAGACAAATTGGTACTAAATATAG
CCAGAGTCGCAATTTAATTTACTTCACATCGACAATTCTCTTAAAACTGGAACGACAAACAGAAGCGATAGATGCACTCA
ATCGTGCTATTGAACTTGCTAAAGAGATTCCCTATCAATATTTTGTAGAAGATGCCTTAGCCAAACTCAAAAAAATTCAA
AGTAGTGATAGTAACATCTAA

Upstream 100 bases:

>100_bases
TGCCTTTTAATCAAGATGAAGTGAAGATGGCAATGAGAATATTTAAAGGGCATCCCCAGAACATAGATAAAACCTTACAA
GCCCTCAAGAGCGAACAGCT

Downstream 100 bases:

>100_bases
AGTAACGCGATGTGCGACTTATTCTTAAAACCCCTCTCCATAGCTTGCTTCTCTGACGATGGCGTAAGCCTACCCGCAGC
AATACGGTTCGGTTAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Domain Protein; SARP Family Transcriptional Regulator; NB-ARC Domain-Containing Protein; Regulatory Protein AfsR; Transcriptional Regulator SARP Family; Tetratricopeptide TPR_2 Repeat Protein; NB-ARC Domain Protein; Transcriptional Regulator; Diguanylate Cyclase/Serine/Threonine Protein Kinase; Tetratricopeptide Repeat-Containing Protein; TPR Domain-Containing Protein; Tetratricopeptide Protein; LOW QUALITY PROTEIN Regulatory Protein AfsR; TPR Repeat Protein; SEFIR Domain Protein; Histidine Kinase; Kinesin Light Chain; Tetratricopeptide Repeat Domain-Containing Protein; LOW QUALITY PROTEIN Tetratricopeptide Repeat Protein; AAA ATPase; Tetratricopeptide Domain-Containing Protein; XRE Family Transcriptional Regulator With TPR Repeat Domain; TPR Repeat-Containing Adenylate/Guanylate Cyclase; Nb-Arc Domain Protein; Tetratricopeptide TPR-2 Repeat-Containing Protein; WD-40 Repeat-Containing Protein; Serine/Threonine Protein Kinase; Peptidase Domain-Containing Protein; AfsR-Like Transcriptional Regulator; O-Linked GlcNAc Transferase; Transcriptional Activator Domain Containing Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MNSELFQKLAKAQTDEERSWIVTESLLATLSPELAAAAWAAVVPHWFNAEILAALRPELQAQSSQLYTKLQALSFVEEFA
DRGHDVHDLTRNLMLKHLWQEHQDEFITLSQRAAEYFGRNNQQPETQIEWLYHLIVVDREWKGSEFWNLAQNWDNSFRVA
ELESLIAALLEQIAAERVETLAKAEVYYWAGKAKFRVYKAKEALERYEEALAFYRNIGVSEAPPVEARLGEANTLQAIGD
VLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGARLGEANTLQAIGD
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGARLGEANTLKAIGD
VLQFLKRSTEALERYEEALAFYRDIGARLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGD
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLQAIGI
LQDDLTVGLEYCQAALELYRQIGTKYSQSRNLIYFTSTILLKLERQTEAIDALNRAIELAKEIPYQYFVEDALAKLKKIQ
SSDSNI

Sequences:

>Translated_646_residues
MNSELFQKLAKAQTDEERSWIVTESLLATLSPELAAAAWAAVVPHWFNAEILAALRPELQAQSSQLYTKLQALSFVEEFA
DRGHDVHDLTRNLMLKHLWQEHQDEFITLSQRAAEYFGRNNQQPETQIEWLYHLIVVDREWKGSEFWNLAQNWDNSFRVA
ELESLIAALLEQIAAERVETLAKAEVYYWAGKAKFRVYKAKEALERYEEALAFYRNIGVSEAPPVEARLGEANTLQAIGD
VLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGARLGEANTLQAIGD
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGARLGEANTLKAIGD
VLQFLKRSTEALERYEEALAFYRDIGARLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGD
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLQAIGI
LQDDLTVGLEYCQAALELYRQIGTKYSQSRNLIYFTSTILLKLERQTEAIDALNRAIELAKEIPYQYFVEDALAKLKKIQ
SSDSNI
>Mature_646_residues
MNSELFQKLAKAQTDEERSWIVTESLLATLSPELAAAAWAAVVPHWFNAEILAALRPELQAQSSQLYTKLQALSFVEEFA
DRGHDVHDLTRNLMLKHLWQEHQDEFITLSQRAAEYFGRNNQQPETQIEWLYHLIVVDREWKGSEFWNLAQNWDNSFRVA
ELESLIAALLEQIAAERVETLAKAEVYYWAGKAKFRVYKAKEALERYEEALAFYRNIGVSEAPPVEARLGEANTLQAIGD
VLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGARLGEANTLQAIGD
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGARLGEANTLKAIGD
VLQFLKRSTEALERYEEALAFYRDIGARLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGD
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLQAIGI
LQDDLTVGLEYCQAALELYRQIGTKYSQSRNLIYFTSTILLKLERQTEAIDALNRAIELAKEIPYQYFVEDALAKLKKIQ
SSDSNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224548925, Length=405, Percent_Identity=25.9259259259259, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI224548927, Length=389, Percent_Identity=25.9640102827763, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI164519122, Length=322, Percent_Identity=26.0869565217391, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI224028289, Length=402, Percent_Identity=23.8805970149254, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24650658, Length=354, Percent_Identity=26.8361581920904, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24660950, Length=328, Percent_Identity=24.6951219512195, Blast_Score=96, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74153; Mature: 74153

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSELFQKLAKAQTDEERSWIVTESLLATLSPELAAAAWAAVVPHWFNAEILAALRPELQ
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AQSSQLYTKLQALSFVEEFADRGHDVHDLTRNLMLKHLWQEHQDEFITLSQRAAEYFGRN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NQQPETQIEWLYHLIVVDREWKGSEFWNLAQNWDNSFRVAELESLIAALLEQIAAERVET
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAKAEVYYWAGKAKFRVYKAKEALERYEEALAFYRNIGVSEAPPVEARLGEANTLQAIGD
HHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH
VLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRDIGARLGEANTLQAIGDVLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLQFLDRRTEALERYEEALAFYRDIGARLGEANTLKAIGDVLQFLKRSTEALERYEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRDIGARLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLKRSTEALERYEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRDIGDRLGEANTLQAIGILQDDLTVGLEYCQAALELYRQIGTKYSQSRNLIYFTSTIL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHH
LKLERQTEAIDALNRAIELAKEIPYQYFVEDALAKLKKIQSSDSNI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNSELFQKLAKAQTDEERSWIVTESLLATLSPELAAAAWAAVVPHWFNAEILAALRPELQ
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AQSSQLYTKLQALSFVEEFADRGHDVHDLTRNLMLKHLWQEHQDEFITLSQRAAEYFGRN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NQQPETQIEWLYHLIVVDREWKGSEFWNLAQNWDNSFRVAELESLIAALLEQIAAERVET
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAKAEVYYWAGKAKFRVYKAKEALERYEEALAFYRNIGVSEAPPVEARLGEANTLQAIGD
HHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH
VLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLDRRTEALERYEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRDIGARLGEANTLQAIGDVLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLQFLDRRTEALERYEEALAFYRDIGARLGEANTLKAIGDVLQFLKRSTEALERYEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRDIGARLGEANTLRAIGDVLQFLDRRTEALERYEEALAFYRDIGDRLGEANTLRAIGD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLQFLKRSTEALERYEEALAFYRDIGDRLGEANTLRAIGDVLQFLKRSTEALERYEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRDIGDRLGEANTLQAIGILQDDLTVGLEYCQAALELYRQIGTKYSQSRNLIYFTSTIL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHH
LKLERQTEAIDALNRAIELAKEIPYQYFVEDALAKLKKIQSSDSNI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA