| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232408
Identifier: 17232408
GI number: 17232408
Start: 5861928
End: 5863526
Strand: Reverse
Name: 17232408
Synonym: all4916
Alternate gene names: NA
Gene position: 5863526-5861928 (Counterclockwise)
Preceding gene: 17232410
Following gene: 17232398
Centisome position: 91.42
GC content: 41.46
Gene sequence:
>1599_bases ATGAGAGATACCGCATCTGACCCAACTGCTGATATTGCTAGAGATTACTTAGAGCGAGAAGACAAGGAAAAACAGGTACT AGCTTTACTTTTGGACAAGTTTTTACAGAAAGAAGACCAAATTCTCGTTCAAAAAACCGAGATGGGGGGTATAGAGGCTT ATATCGGGTCTGTCACGCTGGAATGGTTTGCAGGTAGGGTTCACTTTGCCTCTGGTCTACCTCTGCTGCAAAAAAAGTAT AATGCAGAGACTGATAACGTCGAAATTGACGCGGATAGTATTGACGAAATCCAACAGCGTCCCCTTGACTGGTCACGTCA AGCGCCACTTGTTCAGTATTTAGCAGCTAGAAAAAATCATAAGTTTCCACCAGTCCTAGTGGTAATTAATCAGTCTTGGG TAGATAAGCACAAAGCTGATGAGTGGGATAGTGAAGGATGTGCGAGAAAGTCTACTACTGATTTTACACCCCTGGATCAA GATGGTAAGGTCGGCTTGCTCAATGTGTCTGAGGATAACGTCAGCATTTACGCATTAGATGGACAACATCGATTAATGGG AGTGCAGGGGTTGATAGAGTTAATCAAAACTGGCAAACTCCAGCGATACAAAAAGGATAAAACGGCTGATGATAGTTTTA TCACGGTGTCAGATTTGCTAGAGCAGTATCAAGTAGACCCTGATTATTTACAAAGTTTACCCAAAGAAAAAATAGGTATT GAGTTCATTTGTGCGGTGAATGCTGGGGAGACTCGCACCGAAGCAAGGCGAAGGGTAAGGTCAGTTTTTGTCCATGTTAA CTTAATGGCTGCACCGTTAACTAAAGGTCAGTTAGCACAGCTAAACGAAGATGATGGTTTTGCAATTGTGGCGCGAAAAA TTGCAGTTACTCATCCGCTTTTGGAACAAAAACCAAATCGTAACCCCCGCGTTAATTGGAATAGTGCAACAGTTGCAGCA AATTCCACAGTTTTGACAACTTTGCAAGCATTGCAAGATATGTCAGAAAGATACTTGGGTCAAAAATTCCCACACTGGAA ACCTTTTGAGAAAGGTTTAATTCCTATGCGTCCAGAAGATGAGGAAATTGAGGAGGGAATTGCAGAATTCACCAAACTCT TTGATAACTTGGCAAGCTTACCTAGTTATAAGATTTTGGAACACGAAGATACACCTATTTTAAGACGCTTCAGTTTTGAA AAGGGCGGTGGTGAAGCAAATATACTTTTTCGTCCTGTAGCACAAGTGGCTTTAGCGCAAGCTTTAGGATTTTTAGTTTT TAAAAAAGGTTTGTCTGTAGCCAGCATTTTTAAAAAGTTACGCAAGTTTGACCAGCAAGGGGGTTTTACTGGTATGGAAT ACCCCCAATCTCTGTGGTATGGGGTATTGTATGACCCTAATAAAAAGCGAGTGCAGGTTTCAGGAAAGGAATTGGCGACG AAGTTATTAATTTATATCCTTGGCGGAATTCAAGATTCTATGGAACGTGCTGAACTTCGTAAAGCTTTGGCTAATGCTAG GACTGTAGAAAATAAAACAATTGGGTTTAATGGTGAGTTAGTTGAACCAAAGGAGGTAGGGCTTCCGCCCGTCTTGTAA
Upstream 100 bases:
>100_bases AATGCGCGGGTTGCCAAAAAGTTTTTAAAAACTGATTAACTAGTATCTAACTTTTTGGAAAATATAGCTACACTACAAGA CTAAGTTTTTAAAAATTAAT
Downstream 100 bases:
>100_bases CTACGCTTGAAATACATTTTGGCGATGCCATTGCAGGGATTCTAACTCTGGTAAATATTGCTCCTGATTTGGTAGGAGTA GTCTTTCGCCATGAAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: DGQHR Domain-Containing Protein
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MRDTASDPTADIARDYLEREDKEKQVLALLLDKFLQKEDQILVQKTEMGGIEAYIGSVTLEWFAGRVHFASGLPLLQKKY NAETDNVEIDADSIDEIQQRPLDWSRQAPLVQYLAARKNHKFPPVLVVINQSWVDKHKADEWDSEGCARKSTTDFTPLDQ DGKVGLLNVSEDNVSIYALDGQHRLMGVQGLIELIKTGKLQRYKKDKTADDSFITVSDLLEQYQVDPDYLQSLPKEKIGI EFICAVNAGETRTEARRRVRSVFVHVNLMAAPLTKGQLAQLNEDDGFAIVARKIAVTHPLLEQKPNRNPRVNWNSATVAA NSTVLTTLQALQDMSERYLGQKFPHWKPFEKGLIPMRPEDEEIEEGIAEFTKLFDNLASLPSYKILEHEDTPILRRFSFE KGGGEANILFRPVAQVALAQALGFLVFKKGLSVASIFKKLRKFDQQGGFTGMEYPQSLWYGVLYDPNKKRVQVSGKELAT KLLIYILGGIQDSMERAELRKALANARTVENKTIGFNGELVEPKEVGLPPVL
Sequences:
>Translated_532_residues MRDTASDPTADIARDYLEREDKEKQVLALLLDKFLQKEDQILVQKTEMGGIEAYIGSVTLEWFAGRVHFASGLPLLQKKY NAETDNVEIDADSIDEIQQRPLDWSRQAPLVQYLAARKNHKFPPVLVVINQSWVDKHKADEWDSEGCARKSTTDFTPLDQ DGKVGLLNVSEDNVSIYALDGQHRLMGVQGLIELIKTGKLQRYKKDKTADDSFITVSDLLEQYQVDPDYLQSLPKEKIGI EFICAVNAGETRTEARRRVRSVFVHVNLMAAPLTKGQLAQLNEDDGFAIVARKIAVTHPLLEQKPNRNPRVNWNSATVAA NSTVLTTLQALQDMSERYLGQKFPHWKPFEKGLIPMRPEDEEIEEGIAEFTKLFDNLASLPSYKILEHEDTPILRRFSFE KGGGEANILFRPVAQVALAQALGFLVFKKGLSVASIFKKLRKFDQQGGFTGMEYPQSLWYGVLYDPNKKRVQVSGKELAT KLLIYILGGIQDSMERAELRKALANARTVENKTIGFNGELVEPKEVGLPPVL >Mature_532_residues MRDTASDPTADIARDYLEREDKEKQVLALLLDKFLQKEDQILVQKTEMGGIEAYIGSVTLEWFAGRVHFASGLPLLQKKY NAETDNVEIDADSIDEIQQRPLDWSRQAPLVQYLAARKNHKFPPVLVVINQSWVDKHKADEWDSEGCARKSTTDFTPLDQ DGKVGLLNVSEDNVSIYALDGQHRLMGVQGLIELIKTGKLQRYKKDKTADDSFITVSDLLEQYQVDPDYLQSLPKEKIGI EFICAVNAGETRTEARRRVRSVFVHVNLMAAPLTKGQLAQLNEDDGFAIVARKIAVTHPLLEQKPNRNPRVNWNSATVAA NSTVLTTLQALQDMSERYLGQKFPHWKPFEKGLIPMRPEDEEIEEGIAEFTKLFDNLASLPSYKILEHEDTPILRRFSFE KGGGEANILFRPVAQVALAQALGFLVFKKGLSVASIFKKLRKFDQQGGFTGMEYPQSLWYGVLYDPNKKRVQVSGKELAT KLLIYILGGIQDSMERAELRKALANARTVENKTIGFNGELVEPKEVGLPPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59957; Mature: 59957
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDTASDPTADIARDYLEREDKEKQVLALLLDKFLQKEDQILVQKTEMGGIEAYIGSVTL CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEE EWFAGRVHFASGLPLLQKKYNAETDNVEIDADSIDEIQQRPLDWSRQAPLVQYLAARKNH EHHHCEEEECCCCHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC KFPPVLVVINQSWVDKHKADEWDSEGCARKSTTDFTPLDQDGKVGLLNVSEDNVSIYALD CCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC GQHRLMGVQGLIELIKTGKLQRYKKDKTADDSFITVSDLLEQYQVDPDYLQSLPKEKIGI CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEHHHHHHHHCCCHHHHHHCCHHHCCE EFICAVNAGETRTEARRRVRSVFVHVNLMAAPLTKGQLAQLNEDDGFAIVARKIAVTHPL EEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCEEEEHHHHHHHHHH LEQKPNRNPRVNWNSATVAANSTVLTTLQALQDMSERYLGQKFPHWKPFEKGLIPMRPED HHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCH EEIEEGIAEFTKLFDNLASLPSYKILEHEDTPILRRFSFEKGGGEANILFRPVAQVALAQ HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHH ALGFLVFKKGLSVASIFKKLRKFDQQGGFTGMEYPQSLWYGVLYDPNKKRVQVSGKELAT HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCCEEEECHHHHHH KLLIYILGGIQDSMERAELRKALANARTVENKTIGFNGELVEPKEVGLPPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCCCC >Mature Secondary Structure MRDTASDPTADIARDYLEREDKEKQVLALLLDKFLQKEDQILVQKTEMGGIEAYIGSVTL CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEE EWFAGRVHFASGLPLLQKKYNAETDNVEIDADSIDEIQQRPLDWSRQAPLVQYLAARKNH EHHHCEEEECCCCHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC KFPPVLVVINQSWVDKHKADEWDSEGCARKSTTDFTPLDQDGKVGLLNVSEDNVSIYALD CCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC GQHRLMGVQGLIELIKTGKLQRYKKDKTADDSFITVSDLLEQYQVDPDYLQSLPKEKIGI CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEHHHHHHHHCCCHHHHHHCCHHHCCE EFICAVNAGETRTEARRRVRSVFVHVNLMAAPLTKGQLAQLNEDDGFAIVARKIAVTHPL EEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCEEEEHHHHHHHHHH LEQKPNRNPRVNWNSATVAANSTVLTTLQALQDMSERYLGQKFPHWKPFEKGLIPMRPED HHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCH EEIEEGIAEFTKLFDNLASLPSYKILEHEDTPILRRFSFEKGGGEANILFRPVAQVALAQ HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHH ALGFLVFKKGLSVASIFKKLRKFDQQGGFTGMEYPQSLWYGVLYDPNKKRVQVSGKELAT HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCCEEEECHHHHHH KLLIYILGGIQDSMERAELRKALANARTVENKTIGFNGELVEPKEVGLPPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA