| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232351
Identifier: 17232351
GI number: 17232351
Start: 5786820
End: 5787830
Strand: Reverse
Name: 17232351
Synonym: all4859
Alternate gene names: NA
Gene position: 5787830-5786820 (Counterclockwise)
Preceding gene: 17232352
Following gene: 17232349
Centisome position: 90.24
GC content: 42.73
Gene sequence:
>1011_bases ATGCAACTACCGAGAATTGTTTTCAGATGTTTGGCTGGATTAACTACCCTGGTATCAATTATTGGAGCCAAACCAGTAAT AGCATCTACGACTACCCTAATTAATGAGAACTTCAGTCATCTAAGAAATTGGAAAGACTTAAGTAAAAGCATCACTTGGG GTGGTCATCCAGTTGGTACTTCTGCTTTTCAAATTTTTGATATTGGCGGTGGTAATAAAGCTGTGGGTATTGCTGATGGT ACAACCCATAGCGCTGCTAATACCTTGATTAATGGCTTAAGTAGCAATTACACCACTCTTACAGGCTTAAAAGGATTTTC TGCTTTAGACTGGCAATTTCCTCAACCGATTAATCATGCTACTCGCGTAGTTACCGTGGAGTTTCGCGTTAAATGGATGC AGTTGAGTAATACTAGTTCTGGTGAAGGGGGACGATTTTTAGTTATCCTGAATCACAACTATCCGACAGGTGGACTAAAT CTTACTCCTAACAGTAAATACCATGACTTCAGTACACCTAACGTATGGGCGCAACCAGCCTACCATGCCCGTATTCGCTC TGGAAATAATGCGGCTTCTTTCGCTATGCTCCAATACGGTGGGGGAATGTCTGCATCGGGAGAGTACGAAAAATTTGATG CAAATAATGATAATATTCCTGACTGGTGGTTACCTGGGTTTATCCAAAGTGCTGGCGGTGGTGTTCCAGGTCAAGGTTCC CCCTTTCCTGCTAGTAGCTGGTCGCGTTCAGCTATTGGGTTAGCCTCGACTAATTGGCAGACTTTTCGCTATATAGTCAC GCCAAATACACAAGAACTATGGCGCGATGCTAATGGAAGTGGTAATTTTACTCGTGAGGCGATCATGTTTTTACCGCAGA GTAGTACTGCTCCTTTTTATCAATACTTCACTCAATTGTCTGGTCTAAGACTTTACTGGCGGGCTGCTGGTATCACAAAA GGTCAGGTATTAGTAGATAGATTAAAAGTCACGGTGAACACAATACCGTGA
Upstream 100 bases:
>100_bases CTAGCTTCATATTGAATTGATTCATCAAGTTCAATATGATTACTATAGACGCTCCAACTTCTGACGCTTACACTTGTGGC GCTGAAATAAGAGCGATTTT
Downstream 100 bases:
>100_bases ACCTCATCTGAATTGTATTATACAAGTCTGTCTCCGTGGTTAAAGGAACACCAAAAAATAAACTATTGCAAATTAAAGGT TAGTAGGGTGCGTCAGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MQLPRIVFRCLAGLTTLVSIIGAKPVIASTTTLINENFSHLRNWKDLSKSITWGGHPVGTSAFQIFDIGGGNKAVGIADG TTHSAANTLINGLSSNYTTLTGLKGFSALDWQFPQPINHATRVVTVEFRVKWMQLSNTSSGEGGRFLVILNHNYPTGGLN LTPNSKYHDFSTPNVWAQPAYHARIRSGNNAASFAMLQYGGGMSASGEYEKFDANNDNIPDWWLPGFIQSAGGGVPGQGS PFPASSWSRSAIGLASTNWQTFRYIVTPNTQELWRDANGSGNFTREAIMFLPQSSTAPFYQYFTQLSGLRLYWRAAGITK GQVLVDRLKVTVNTIP
Sequences:
>Translated_336_residues MQLPRIVFRCLAGLTTLVSIIGAKPVIASTTTLINENFSHLRNWKDLSKSITWGGHPVGTSAFQIFDIGGGNKAVGIADG TTHSAANTLINGLSSNYTTLTGLKGFSALDWQFPQPINHATRVVTVEFRVKWMQLSNTSSGEGGRFLVILNHNYPTGGLN LTPNSKYHDFSTPNVWAQPAYHARIRSGNNAASFAMLQYGGGMSASGEYEKFDANNDNIPDWWLPGFIQSAGGGVPGQGS PFPASSWSRSAIGLASTNWQTFRYIVTPNTQELWRDANGSGNFTREAIMFLPQSSTAPFYQYFTQLSGLRLYWRAAGITK GQVLVDRLKVTVNTIP >Mature_336_residues MQLPRIVFRCLAGLTTLVSIIGAKPVIASTTTLINENFSHLRNWKDLSKSITWGGHPVGTSAFQIFDIGGGNKAVGIADG TTHSAANTLINGLSSNYTTLTGLKGFSALDWQFPQPINHATRVVTVEFRVKWMQLSNTSSGEGGRFLVILNHNYPTGGLN LTPNSKYHDFSTPNVWAQPAYHARIRSGNNAASFAMLQYGGGMSASGEYEKFDANNDNIPDWWLPGFIQSAGGGVPGQGS PFPASSWSRSAIGLASTNWQTFRYIVTPNTQELWRDANGSGNFTREAIMFLPQSSTAPFYQYFTQLSGLRLYWRAAGITK GQVLVDRLKVTVNTIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36619; Mature: 36619
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPRIVFRCLAGLTTLVSIIGAKPVIASTTTLINENFSHLRNWKDLSKSITWGGHPVGT CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC SAFQIFDIGGGNKAVGIADGTTHSAANTLINGLSSNYTTLTGLKGFSALDWQFPQPINHA CEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCC TRVVTVEFRVKWMQLSNTSSGEGGRFLVILNHNYPTGGLNLTPNSKYHDFSTPNVWAQPA EEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCC YHARIRSGNNAASFAMLQYGGGMSASGEYEKFDANNDNIPDWWLPGFIQSAGGGVPGQGS CEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCC PFPASSWSRSAIGLASTNWQTFRYIVTPNTQELWRDANGSGNFTREAIMFLPQSSTAPFY CCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEEEECCCCCCHHH QYFTQLSGLRLYWRAAGITKGQVLVDRLKVTVNTIP HHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEECCC >Mature Secondary Structure MQLPRIVFRCLAGLTTLVSIIGAKPVIASTTTLINENFSHLRNWKDLSKSITWGGHPVGT CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC SAFQIFDIGGGNKAVGIADGTTHSAANTLINGLSSNYTTLTGLKGFSALDWQFPQPINHA CEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCC TRVVTVEFRVKWMQLSNTSSGEGGRFLVILNHNYPTGGLNLTPNSKYHDFSTPNVWAQPA EEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCC YHARIRSGNNAASFAMLQYGGGMSASGEYEKFDANNDNIPDWWLPGFIQSAGGGVPGQGS CEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCC PFPASSWSRSAIGLASTNWQTFRYIVTPNTQELWRDANGSGNFTREAIMFLPQSSTAPFY CCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEEEECCCCCCHHH QYFTQLSGLRLYWRAAGITKGQVLVDRLKVTVNTIP HHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA