| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232327
Identifier: 17232327
GI number: 17232327
Start: 5759190
End: 5760494
Strand: Reverse
Name: 17232327
Synonym: all4835
Alternate gene names: NA
Gene position: 5760494-5759190 (Counterclockwise)
Preceding gene: 17232330
Following gene: 17232326
Centisome position: 89.81
GC content: 39.23
Gene sequence:
>1305_bases ATGAAGTTAGATTTAATCAGGTTTTTTCAGGCGTGCAATCCTAGCAAAACTTTGGCTGTCAGCAAACCGGAGGATAGACA ATATTACATTGATTTTTCTAAGGTGCGGGGTAGCAAGATTATTGACGAATTAGGGCGAACTATCACCAGGCTTTCACCAG ATGAACCTACTTGTCAGTTGTTTACTGGTCATATTGGTTGTGGTAAATCAACGGAATTACTCCGCCTGAAATCAGAGTTA GAACAGCAGGGATTTCATGTAGTGTACTTTGAGTCTAGCCAAAGCCTGGATATGGCTGATGTAGACGTGACAGATATTTT ATTAGCAATAGCCCGTGAGGTGAGTCAAAGTCTAGAGGCAATCAAGATTAACCTCAAACCTGGATACTTCCAAAATTTGT TTACAGAAATTGTGGGTTTTTTGCAAACACCCCTAGATATTGGCGTAGAAGCGGAGTTATCTGTAGGTATTGGCAAAATT ACCGCTAAAACTAAAGATAGTCCGAAACTGCGATCGCAATTACGGCAATATCTAGAACCACGCACCAATGGTATTTTAGA GTCTATCAATAAAGAACTACTACAACCAGCGATCGCTAAACTGAAATTGCAAGGTAAAAAAGGATTAGTGGTCATCATTG ACAATCTTGACCGCATTGATAACTCATTGAAGCCTACAGGACAAATCCAGCCTGAATATTTATTTGTAGAACGTGGTGAA CAGTTAAACCAACTAAACTGCCATGTTGTTTATACAATTCCCTTAGTTTTAATATTCTCCAATGCTTTAGGTAGATTAAC AAATCGTTTTGGTATTGACCCCAAAGTCCTGCCAATGGTACCTGTAAAACTTCAAAACGGTACTAAATTTGCCCAGGGAA TCAACTTACTACAACAGATGGTAATGGCCAGGGCGTTTCCTGGCGTAAGTTGGGAACAAAACCAAACGTTAATTACAGAG GTTTTTGATAGCGCTGAAACATTGGATAGACTGTGCTTAGTTAGTGGTGGCCATTTGCGTAATTTGCTCATGATATTATT TCGCTGTCTTCAACAAGAAGACCCCCCCATTTCGCGGAAATGTCTAGATAGGGTAATTAAACAACGCTGTAATGAACTTT CATTGGCTATTACTCCTGATGAATGGGAAGTTCTTTACGAAGTAGCGCAAGATAAAAGCTTGAGAGGTCATGAAAAATAT GAACTTTTGCTTCCCAGTATGTTTGTATTTGAATACCGAGACGAGGATGGTTCCTGGTTTGATATTAATCCGATTTTGGC AGAAGCCAAAGACTTTAAATTATAA
Upstream 100 bases:
>100_bases AGAAAATAACCTTTTATTAGCAATTTCTAATTATTAGTAATGATATCGTTATAATCCTGAAATATAGGGCTATTACCAGG CTGATTTCGGGTGATTTCTC
Downstream 100 bases:
>100_bases GATGTTGTCTTGTTCATAAGATGAATAATCTACCTAATTCCCATAACTTAACTCCTGAGAATGAGCAGTCGTTACAAACT TTGGTAAGGGCAATTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKLDLIRFFQACNPSKTLAVSKPEDRQYYIDFSKVRGSKIIDELGRTITRLSPDEPTCQLFTGHIGCGKSTELLRLKSEL EQQGFHVVYFESSQSLDMADVDVTDILLAIAREVSQSLEAIKINLKPGYFQNLFTEIVGFLQTPLDIGVEAELSVGIGKI TAKTKDSPKLRSQLRQYLEPRTNGILESINKELLQPAIAKLKLQGKKGLVVIIDNLDRIDNSLKPTGQIQPEYLFVERGE QLNQLNCHVVYTIPLVLIFSNALGRLTNRFGIDPKVLPMVPVKLQNGTKFAQGINLLQQMVMARAFPGVSWEQNQTLITE VFDSAETLDRLCLVSGGHLRNLLMILFRCLQQEDPPISRKCLDRVIKQRCNELSLAITPDEWEVLYEVAQDKSLRGHEKY ELLLPSMFVFEYRDEDGSWFDINPILAEAKDFKL
Sequences:
>Translated_434_residues MKLDLIRFFQACNPSKTLAVSKPEDRQYYIDFSKVRGSKIIDELGRTITRLSPDEPTCQLFTGHIGCGKSTELLRLKSEL EQQGFHVVYFESSQSLDMADVDVTDILLAIAREVSQSLEAIKINLKPGYFQNLFTEIVGFLQTPLDIGVEAELSVGIGKI TAKTKDSPKLRSQLRQYLEPRTNGILESINKELLQPAIAKLKLQGKKGLVVIIDNLDRIDNSLKPTGQIQPEYLFVERGE QLNQLNCHVVYTIPLVLIFSNALGRLTNRFGIDPKVLPMVPVKLQNGTKFAQGINLLQQMVMARAFPGVSWEQNQTLITE VFDSAETLDRLCLVSGGHLRNLLMILFRCLQQEDPPISRKCLDRVIKQRCNELSLAITPDEWEVLYEVAQDKSLRGHEKY ELLLPSMFVFEYRDEDGSWFDINPILAEAKDFKL >Mature_434_residues MKLDLIRFFQACNPSKTLAVSKPEDRQYYIDFSKVRGSKIIDELGRTITRLSPDEPTCQLFTGHIGCGKSTELLRLKSEL EQQGFHVVYFESSQSLDMADVDVTDILLAIAREVSQSLEAIKINLKPGYFQNLFTEIVGFLQTPLDIGVEAELSVGIGKI TAKTKDSPKLRSQLRQYLEPRTNGILESINKELLQPAIAKLKLQGKKGLVVIIDNLDRIDNSLKPTGQIQPEYLFVERGE QLNQLNCHVVYTIPLVLIFSNALGRLTNRFGIDPKVLPMVPVKLQNGTKFAQGINLLQQMVMARAFPGVSWEQNQTLITE VFDSAETLDRLCLVSGGHLRNLLMILFRCLQQEDPPISRKCLDRVIKQRCNELSLAITPDEWEVLYEVAQDKSLRGHEKY ELLLPSMFVFEYRDEDGSWFDINPILAEAKDFKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49232; Mature: 49232
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDLIRFFQACNPSKTLAVSKPEDRQYYIDFSKVRGSKIIDELGRTITRLSPDEPTCQL CCCHHHHHHHHCCCCCEEEECCCCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCEEE FTGHIGCGKSTELLRLKSELEQQGFHVVYFESSQSLDMADVDVTDILLAIAREVSQSLEA EECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHE IKINLKPGYFQNLFTEIVGFLQTPLDIGVEAELSVGIGKITAKTKDSPKLRSQLRQYLEP EEEECCCCHHHHHHHHHHHHHHCCHHCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHCH RTNGILESINKELLQPAIAKLKLQGKKGLVVIIDNLDRIDNSLKPTGQIQPEYLFVERGE HHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHCCCCCCCCCCCCCEEEEECCC QLNQLNCHVVYTIPLVLIFSNALGRLTNRFGIDPKVLPMVPVKLQNGTKFAQGINLLQQM CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH VMARAFPGVSWEQNQTLITEVFDSAETLDRLCLVSGGHLRNLLMILFRCLQQEDPPISRK HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH CLDRVIKQRCNELSLAITPDEWEVLYEVAQDKSLRGHEKYELLLPSMFVFEYRDEDGSWF HHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEECCCCCEE DINPILAEAKDFKL ECCHHHHCCCCCCC >Mature Secondary Structure MKLDLIRFFQACNPSKTLAVSKPEDRQYYIDFSKVRGSKIIDELGRTITRLSPDEPTCQL CCCHHHHHHHHCCCCCEEEECCCCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCEEE FTGHIGCGKSTELLRLKSELEQQGFHVVYFESSQSLDMADVDVTDILLAIAREVSQSLEA EECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHE IKINLKPGYFQNLFTEIVGFLQTPLDIGVEAELSVGIGKITAKTKDSPKLRSQLRQYLEP EEEECCCCHHHHHHHHHHHHHHCCHHCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHCH RTNGILESINKELLQPAIAKLKLQGKKGLVVIIDNLDRIDNSLKPTGQIQPEYLFVERGE HHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHCCCCCCCCCCCCCEEEEECCC QLNQLNCHVVYTIPLVLIFSNALGRLTNRFGIDPKVLPMVPVKLQNGTKFAQGINLLQQM CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH VMARAFPGVSWEQNQTLITEVFDSAETLDRLCLVSGGHLRNLLMILFRCLQQEDPPISRK HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH CLDRVIKQRCNELSLAITPDEWEVLYEVAQDKSLRGHEKYELLLPSMFVFEYRDEDGSWF HHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEECCCCCEE DINPILAEAKDFKL ECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA