| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232255
Identifier: 17232255
GI number: 17232255
Start: 5676915
End: 5677538
Strand: Reverse
Name: 17232255
Synonym: all4763
Alternate gene names: NA
Gene position: 5677538-5676915 (Counterclockwise)
Preceding gene: 17232256
Following gene: 17232254
Centisome position: 88.52
GC content: 37.18
Gene sequence:
>624_bases ATGCCTAGAAAACAGAATCTCTCCGACTTAATCCAAGAGGAAGCCCAAAAATTTACACCATCTGCTGGCGAAACCGCCAT TGAAGTGACAGCTCAAGAAGTGGTTGAAGAAACTTCTACTACCCCAGAAGAATCAGAACAGACGCTGGAAGCAACTGCTA CTAAACGTAGCACTCCTACTAAAGCAGATTTAGAAGCTACTATCAAAGAATTACAAGCAAGTTTACAAAAATCTGAACAA CAGGAAAAATCGCTACAGCAAAAAATAGATGATTTGCAATCAGCTTTATCTGAACAAAAATCTTCAGTCAAAAAACTTAC CAAGGAACTAGACGAAACCAAAAAAACTGCCCTACAACTGGCAGAAGCTAACTCCCAGCTGATAGAAGAACAGAAATCTT TGGCTTTGGCACAGGAAAAAGAACTTCTAGAAAAAGAACAGCTAGAAAAACAAAGACAACTGAATGAACAGCTAGAAAAA GAACAGCTAGAAAAACAAAGACAAGAGAAAGAAAGCTATAAACCAGTACATTATAGAAAATCACATCGTCTGCCTGAAAA GTACCCAACACAACAGATAGAAACTAATGATGATTTCTCTTCAAATACTTGGTTGTATGATTAA
Upstream 100 bases:
>100_bases ACGGTGTAGCTATTGACCAATGGCGAGGCAAAAATGCTAGAGAAGCGGAATCAGACTACCATCGAGTGGCGGAAGAATTA CAGCGTGACTGGAGGAAATA
Downstream 100 bases:
>100_bases AGATAGAAGGCAGGGGTCATAAGAGCTTAGGAGGAAGGATTTGATATTACATCCTTTATCTCCCGTCCTGTGGTTTGGCA GTAGCGTCTCTAAAAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPRKQNLSDLIQEEAQKFTPSAGETAIEVTAQEVVEETSTTPEESEQTLEATATKRSTPTKADLEATIKELQASLQKSEQ QEKSLQQKIDDLQSALSEQKSSVKKLTKELDETKKTALQLAEANSQLIEEQKSLALAQEKELLEKEQLEKQRQLNEQLEK EQLEKQRQEKESYKPVHYRKSHRLPEKYPTQQIETNDDFSSNTWLYD
Sequences:
>Translated_207_residues MPRKQNLSDLIQEEAQKFTPSAGETAIEVTAQEVVEETSTTPEESEQTLEATATKRSTPTKADLEATIKELQASLQKSEQ QEKSLQQKIDDLQSALSEQKSSVKKLTKELDETKKTALQLAEANSQLIEEQKSLALAQEKELLEKEQLEKQRQLNEQLEK EQLEKQRQEKESYKPVHYRKSHRLPEKYPTQQIETNDDFSSNTWLYD >Mature_206_residues PRKQNLSDLIQEEAQKFTPSAGETAIEVTAQEVVEETSTTPEESEQTLEATATKRSTPTKADLEATIKELQASLQKSEQQ EKSLQQKIDDLQSALSEQKSSVKKLTKELDETKKTALQLAEANSQLIEEQKSLALAQEKELLEKEQLEKQRQLNEQLEKE QLEKQRQEKESYKPVHYRKSHRLPEKYPTQQIETNDDFSSNTWLYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23864; Mature: 23732
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKQNLSDLIQEEAQKFTPSAGETAIEVTAQEVVEETSTTPEESEQTLEATATKRSTPT CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KADLEATIKELQASLQKSEQQEKSLQQKIDDLQSALSEQKSSVKKLTKELDETKKTALQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEANSQLIEEQKSLALAQEKELLEKEQLEKQRQLNEQLEKEQLEKQRQEKESYKPVHYRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SHRLPEKYPTQQIETNDDFSSNTWLYD HCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRKQNLSDLIQEEAQKFTPSAGETAIEVTAQEVVEETSTTPEESEQTLEATATKRSTPT CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KADLEATIKELQASLQKSEQQEKSLQQKIDDLQSALSEQKSSVKKLTKELDETKKTALQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEANSQLIEEQKSLALAQEKELLEKEQLEKQRQLNEQLEKEQLEKQRQEKESYKPVHYRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SHRLPEKYPTQQIETNDDFSSNTWLYD HCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA