Click here to switch to the map view.

The map label for this gene is 17232033

Identifier: 17232033

GI number: 17232033

Start: 5433605

End: 5434186

Strand: Reverse

Name: 17232033

Synonym: all4541

Alternate gene names: NA

Gene position: 5434186-5433605 (Counterclockwise)

Preceding gene: 17232036

Following gene: 17232032

Centisome position: 84.73

GC content: 39.35

Gene sequence:

>582_bases
ATGTATGAATCATTTCACGAATTCATTCGGCAACTTTTGCCCGATTTCAAAATTGACCTCACCCTTGTTGAACCACTTTT
AGAGGTCAAAAAAGTTAATAAGGGTGAATTCTTTTTGCGGGAGGGTGATGTTTGTGAAGTTCTTGGCTTGACGCTGAAAG
GTTGTCTGAGAACATTTTTCTTAAAAGACGGAAAAGAGTTCACTTTATTTTTTCATGTCGAACATCAACCACTGGGTGAT
TACGAGAGCTTTTGCAAACAAATACCCGCCTGTTTTTCTTGTGAGGCGATTGAAGATTCTGAGGTACTGGTTATCAACCA
TGAGGCATTAGAAGTTTTTGAAGTAAGTCCAGATGGACAAAAACTTTTGAGGCTCCATGCTGAAAGTCTTGCGTTTATGC
TGCGAGATAAATTGCTGTCTCTTTTTAGGGATACGCCTGAACAGCGTTATCTGAAGATAATTCAAAAAGAACCCGAACTC
TTACAGCGCATTCCTCAATACTACCTAGCATCATATCTGGGAATTGAACCAGAATCTTTAAGCCGATTAAAACGCAGAGT
CAAACAGCAGCAAGTTTCTTAA

Upstream 100 bases:

>100_bases
AAATAGTATATAAACTAATTTAATCATCTTACCTTTAGAGAATTGCTACTTGAGCTTAGATCAGGTTCAAACCATCACAA
GTTTAAATTCCGATGATCAA

Downstream 100 bases:

>100_bases
CCTAAGTCAATGCAACAGAGCAACTAACAAGGTAGATTCGTAACGCAATATTTCAGCATCAAAACCTTTCATGTCATTAG
AAGATAATAAATTTATAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Catabolite Gene Activator Protein; Regulatory Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MYESFHEFIRQLLPDFKIDLTLVEPLLEVKKVNKGEFFLREGDVCEVLGLTLKGCLRTFFLKDGKEFTLFFHVEHQPLGD
YESFCKQIPACFSCEAIEDSEVLVINHEALEVFEVSPDGQKLLRLHAESLAFMLRDKLLSLFRDTPEQRYLKIIQKEPEL
LQRIPQYYLASYLGIEPESLSRLKRRVKQQQVS

Sequences:

>Translated_193_residues
MYESFHEFIRQLLPDFKIDLTLVEPLLEVKKVNKGEFFLREGDVCEVLGLTLKGCLRTFFLKDGKEFTLFFHVEHQPLGD
YESFCKQIPACFSCEAIEDSEVLVINHEALEVFEVSPDGQKLLRLHAESLAFMLRDKLLSLFRDTPEQRYLKIIQKEPEL
LQRIPQYYLASYLGIEPESLSRLKRRVKQQQVS
>Mature_193_residues
MYESFHEFIRQLLPDFKIDLTLVEPLLEVKKVNKGEFFLREGDVCEVLGLTLKGCLRTFFLKDGKEFTLFFHVEHQPLGD
YESFCKQIPACFSCEAIEDSEVLVINHEALEVFEVSPDGQKLLRLHAESLAFMLRDKLLSLFRDTPEQRYLKIIQKEPEL
LQRIPQYYLASYLGIEPESLSRLKRRVKQQQVS

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22632; Mature: 22632

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYESFHEFIRQLLPDFKIDLTLVEPLLEVKKVNKGEFFLREGDVCEVLGLTLKGCLRTFF
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
LKDGKEFTLFFHVEHQPLGDYESFCKQIPACFSCEAIEDSEVLVINHEALEVFEVSPDGQ
HCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHH
KLLRLHAESLAFMLRDKLLSLFRDTPEQRYLKIIQKEPELLQRIPQYYLASYLGIEPESL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
SRLKRRVKQQQVS
HHHHHHHHHHCCC
>Mature Secondary Structure
MYESFHEFIRQLLPDFKIDLTLVEPLLEVKKVNKGEFFLREGDVCEVLGLTLKGCLRTFF
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
LKDGKEFTLFFHVEHQPLGDYESFCKQIPACFSCEAIEDSEVLVINHEALEVFEVSPDGQ
HCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHH
KLLRLHAESLAFMLRDKLLSLFRDTPEQRYLKIIQKEPELLQRIPQYYLASYLGIEPESL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
SRLKRRVKQQQVS
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA