| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231996
Identifier: 17231996
GI number: 17231996
Start: 5394283
End: 5395266
Strand: Direct
Name: 17231996
Synonym: alr4504
Alternate gene names: NA
Gene position: 5394283-5395266 (Clockwise)
Preceding gene: 17231990
Following gene: 17231997
Centisome position: 84.1
GC content: 32.32
Gene sequence:
>984_bases ATGACGACAGTTGCACTCAAAGATAGTAAGCAGCAACTAATGCAAGCATTTCAACAAATTTTAGCAGAACAGAGAAAACT AGAATCCAAAATAGCCACTAAACAAGAAGAAGCAGATAAGGCAAAAAATCAAGAAATTTTGGCAATTGCTTCTCAATATA CTGTTGATAGTATTGTCAAATCTTTAGCAGATTTACAATTAGAATTTGGTAGTACGGTTAATGAACTCTCTACAAAATTG GCTAAAGAAAACTCTAAATTAGATGAGTTAAACCAATCTATAGAAATTGAAACAAAGCATTTACAAGAGTTGCAAAGAAT TAGAATTGTTGCAGATACTTTAGATATTTTGACCCAAGAACACCAGGAAAAATTAAAAACTCTAGAGCAAGATACGGCTA GTAAAAGAGAAGCTTTAGAAAAAGAAATATCAGCTAGACGTAAAGAGTGGCAAAAAGAGCAAGTAGAATATGCAGAATCT CTACAAGCTTACAATGATATTTTAGCGAAAGAACGCCAACAGGAAGAAGAAGAATATCGATATAAATTAGAAACAACTCG TAAACTAAACACAGATATATACGAATCTAAGAAACGCAATTCAGAAAGAGACATTCAAGAAAAAACTCAACAAAAAGAAA AAGATTGGTTAGAAAGAGAGAAACTTAATACTGAACGTCAAACCATCTTTGCAGAATATCAACAAAAAGTAGCTGCATTC CCAGCAGAATTAGAAGAAGCAGTGAAAAAATCTAGAGAGGAAGCAATTAAAGATACCAGTCAGAAGGCTAAGATTGAAGC AGATTTATTTGAAAAGGAGTGGGAAGCCAGTAAGCAAAGTTACGAATTGAAAATTAAATCACTGGAAGAAACAATTCAAA AACAAACTGAACAAATAGAAAGTATTTCTGCTCAATTGCAAACAACACTAAAACAATCACAAGATTTAGCAATGAGAGCT TTTGATAGTTCTACGGCTAAATAA
Upstream 100 bases:
>100_bases CTTAAATGTATATTTAGGGGCTACCATCATGTGTGCATGGAGTAGTTACTGGTATTGCTGACTACTCGATTAATCATTAT CTAATCAAGGGAGTTGAAAT
Downstream 100 bases:
>100_bases ATATTAATTTTGGGAAATTTGCAATAAATAGAGGTTTTTATGGCAGTCAAAAAGTTAACAGACAAAAACACCAAAGCAGA AATTTTACAGGCTTATGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTTVALKDSKQQLMQAFQQILAEQRKLESKIATKQEEADKAKNQEILAIASQYTVDSIVKSLADLQLEFGSTVNELSTKL AKENSKLDELNQSIEIETKHLQELQRIRIVADTLDILTQEHQEKLKTLEQDTASKREALEKEISARRKEWQKEQVEYAES LQAYNDILAKERQQEEEEYRYKLETTRKLNTDIYESKKRNSERDIQEKTQQKEKDWLEREKLNTERQTIFAEYQQKVAAF PAELEEAVKKSREEAIKDTSQKAKIEADLFEKEWEASKQSYELKIKSLEETIQKQTEQIESISAQLQTTLKQSQDLAMRA FDSSTAK
Sequences:
>Translated_327_residues MTTVALKDSKQQLMQAFQQILAEQRKLESKIATKQEEADKAKNQEILAIASQYTVDSIVKSLADLQLEFGSTVNELSTKL AKENSKLDELNQSIEIETKHLQELQRIRIVADTLDILTQEHQEKLKTLEQDTASKREALEKEISARRKEWQKEQVEYAES LQAYNDILAKERQQEEEEYRYKLETTRKLNTDIYESKKRNSERDIQEKTQQKEKDWLEREKLNTERQTIFAEYQQKVAAF PAELEEAVKKSREEAIKDTSQKAKIEADLFEKEWEASKQSYELKIKSLEETIQKQTEQIESISAQLQTTLKQSQDLAMRA FDSSTAK >Mature_326_residues TTVALKDSKQQLMQAFQQILAEQRKLESKIATKQEEADKAKNQEILAIASQYTVDSIVKSLADLQLEFGSTVNELSTKLA KENSKLDELNQSIEIETKHLQELQRIRIVADTLDILTQEHQEKLKTLEQDTASKREALEKEISARRKEWQKEQVEYAESL QAYNDILAKERQQEEEEYRYKLETTRKLNTDIYESKKRNSERDIQEKTQQKEKDWLEREKLNTERQTIFAEYQQKVAAFP AELEEAVKKSREEAIKDTSQKAKIEADLFEKEWEASKQSYELKIKSLEETIQKQTEQIESISAQLQTTLKQSQDLAMRAF DSSTAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38218; Mature: 38087
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVALKDSKQQLMQAFQQILAEQRKLESKIATKQEEADKAKNQEILAIASQYTVDSIVK CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SLADLQLEFGSTVNELSTKLAKENSKLDELNQSIEIETKHLQELQRIRIVADTLDILTQE HHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQEKLKTLEQDTASKREALEKEISARRKEWQKEQVEYAESLQAYNDILAKERQQEEEEYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKLETTRKLNTDIYESKKRNSERDIQEKTQQKEKDWLEREKLNTERQTIFAEYQQKVAAF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC PAELEEAVKKSREEAIKDTSQKAKIEADLFEKEWEASKQSYELKIKSLEETIQKQTEQIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISAQLQTTLKQSQDLAMRAFDSSTAK HHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTVALKDSKQQLMQAFQQILAEQRKLESKIATKQEEADKAKNQEILAIASQYTVDSIVK CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SLADLQLEFGSTVNELSTKLAKENSKLDELNQSIEIETKHLQELQRIRIVADTLDILTQE HHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQEKLKTLEQDTASKREALEKEISARRKEWQKEQVEYAESLQAYNDILAKERQQEEEEYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKLETTRKLNTDIYESKKRNSERDIQEKTQQKEKDWLEREKLNTERQTIFAEYQQKVAAF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC PAELEEAVKKSREEAIKDTSQKAKIEADLFEKEWEASKQSYELKIKSLEETIQKQTEQIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISAQLQTTLKQSQDLAMRAFDSSTAK HHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA