| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231971
Identifier: 17231971
GI number: 17231971
Start: 5364769
End: 5365260
Strand: Reverse
Name: 17231971
Synonym: all4479
Alternate gene names: NA
Gene position: 5365260-5364769 (Counterclockwise)
Preceding gene: 17231972
Following gene: 17231970
Centisome position: 83.65
GC content: 43.29
Gene sequence:
>492_bases GTGTTCCGTCCACTAAAACCTTTCGCCTCTCGCCAACTCCTATGGGGTATGGTTTCAGCAGTATTATTCTTGACAAGTAT TGTCATATTTCCTGCACCTACTTGGGCTTCTCATTCTGGGTTGGGGGTTGATAGCGGTCATCTTAGTGCTTGTCCAGCTT CCCCAAATTGTGTTGTCAGTCAAAATGCCGATACTAAACACGCCATTGAACCAATTCCCTATCATATAGACCGCGACAAA GCACGAGAAATTTTACTCAAGGTGCTGACAGTCGTTCCGCGTACAGAGGTTGTAGAACAGACAGATAACTATATCCATGC CCTTTCTAAAAGCCGTATTTTTAAATTTGTTGATGATGTAGAATTTTACTTACCGCCTAATGAGTCAGTGATTCATTTGC GATCGGCATCTCGCATCGGAGATTCTGATCTCGGTGTTAATCGCAGGCGTATGGAGCAAATTCGTCTGGCTTTGCTGGAT TTGAATATTTAA
Upstream 100 bases:
>100_bases ATGCGGGAATTTAAAAAGTGCTGAGTGTGAGGTGATATCAGTCGTTCTTTCTTCATTACGAGTTACGAATTGGTATTAAA CTTTGAGGAGTATACTTATC
Downstream 100 bases:
>100_bases GGTAACACCAAAAAATAAATTATCCGAAATTGCTTGTTTGGTAAGGTGCGTCAGTATGAATAATTTCTGAACATAGTTAG GTTCCATCGCACTGACGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MFRPLKPFASRQLLWGMVSAVLFLTSIVIFPAPTWASHSGLGVDSGHLSACPASPNCVVSQNADTKHAIEPIPYHIDRDK AREILLKVLTVVPRTEVVEQTDNYIHALSKSRIFKFVDDVEFYLPPNESVIHLRSASRIGDSDLGVNRRRMEQIRLALLD LNI
Sequences:
>Translated_163_residues MFRPLKPFASRQLLWGMVSAVLFLTSIVIFPAPTWASHSGLGVDSGHLSACPASPNCVVSQNADTKHAIEPIPYHIDRDK AREILLKVLTVVPRTEVVEQTDNYIHALSKSRIFKFVDDVEFYLPPNESVIHLRSASRIGDSDLGVNRRRMEQIRLALLD LNI >Mature_163_residues MFRPLKPFASRQLLWGMVSAVLFLTSIVIFPAPTWASHSGLGVDSGHLSACPASPNCVVSQNADTKHAIEPIPYHIDRDK AREILLKVLTVVPRTEVVEQTDNYIHALSKSRIFKFVDDVEFYLPPNESVIHLRSASRIGDSDLGVNRRRMEQIRLALLD LNI
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18286; Mature: 18286
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRPLKPFASRQLLWGMVSAVLFLTSIVIFPAPTWASHSGLGVDSGHLSACPASPNCVVS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QNADTKHAIEPIPYHIDRDKAREILLKVLTVVPRTEVVEQTDNYIHALSKSRIFKFVDDV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCE EFYLPPNESVIHLRSASRIGDSDLGVNRRRMEQIRLALLDLNI EEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MFRPLKPFASRQLLWGMVSAVLFLTSIVIFPAPTWASHSGLGVDSGHLSACPASPNCVVS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QNADTKHAIEPIPYHIDRDKAREILLKVLTVVPRTEVVEQTDNYIHALSKSRIFKFVDDV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCE EFYLPPNESVIHLRSASRIGDSDLGVNRRRMEQIRLALLDLNI EEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA