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The map label for this gene is rpmG

Identifier: 17231944

GI number: 17231944

Start: 5338579

End: 5338773

Strand: Reverse

Name: rpmG

Synonym: asl4452

Alternate gene names: 17231944

Gene position: 5338773-5338579 (Counterclockwise)

Preceding gene: 17231945

Following gene: 17231943

Centisome position: 83.24

GC content: 43.59

Gene sequence:

>195_bases
ATGGCTAAAAGTAAAGGTGCGCGCATTATAGTCACACTAGAGTGTACTGAATGCCGGACAAATCCAGACAAGCGATCGCC
AGGTGTTTCCCGGTATACCTCAACCAAGAACCGTCGTAACACCACCAATCGTCTAGAACTAAAAAAGTTCTGTACCCACT
GTAATAAACATACCGTTCACAAGGAAATCAAGTAA

Upstream 100 bases:

>100_bases
TTGATTTAAAAATTAAGCGATTAGTTGGAACTTTACGACGAAATGTGAGACGATAGTCATTTGTGTTAATTCTCTTCAGG
CTTTAGCGTTTGATAAGATT

Downstream 100 bases:

>100_bases
AGATGAGCTATTACCGTCGTCGCCTGTCTCCAATTAAGCCTGGAGAACCGATTGATTACAAAGACGTTGATTTATTGCGT
AAATTTATCACCGAGCGTGG

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MAKSKGARIIVTLECTECRTNPDKRSPGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVHKEIK

Sequences:

>Translated_64_residues
MAKSKGARIIVTLECTECRTNPDKRSPGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVHKEIK
>Mature_63_residues
AKSKGARIIVTLECTECRTNPDKRSPGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVHKEIK

Specific function: Unknown

COG id: COG0267

COG function: function code J; Ribosomal protein L33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL33_ANAVT (Q3MDJ2)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_321839.1
- ProteinModelPortal:   Q3MDJ2
- SMR:   Q3MDJ2
- STRING:   Q3MDJ2
- GeneID:   3682966
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_1320
- eggNOG:   COG0267
- HOGENOM:   HBG751058
- OMA:   RIVITLE
- ProtClustDB:   PRK00504
- BioCyc:   AVAR240292:AVA_1320-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR018264
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7418; Mature: 7286

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSKGARIIVTLECTECRTNPDKRSPGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVH
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
KEIK
CCCC
>Mature Secondary Structure 
AKSKGARIIVTLECTECRTNPDKRSPGVSRYTSTKNRRNTTNRLELKKFCTHCNKHTVH
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
KEIK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA