| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is cpsE [H]
Identifier: 17231912
GI number: 17231912
Start: 5298269
End: 5299606
Strand: Reverse
Name: cpsE [H]
Synonym: all4420
Alternate gene names: 17231912
Gene position: 5299606-5298269 (Counterclockwise)
Preceding gene: 17231914
Following gene: 17231911
Centisome position: 82.63
GC content: 38.04
Gene sequence:
>1338_bases ATGCGTGTGGTAATTCTGGTATTTTTGGATGCAGTATTTATAGCCTCTGCATGGAATTTAGCAGTTTTGTCCAGTAATTC CATTGAATTATTTTCGATACAAAATATATCGTTTATGCTGCTCAATTTGAGCTTGGCGATCGCTATATTTCAAACAACAG GGCTTTATAAAGCAGGTATTCACAGGCGGAACTATGCAGGTATAGTTAAAGCAATTTCTTTATCATCTGTATTGTTGTTA TTTGTAGAGGTTCTCTATGGAGAAAATACTTATATTCCCTATGCAACTTTTCTAGTGCATTGGTTATTGTCCATCAGCTT CATTTGCTCTTTTCGTTATTTATTTAACTTCTTTACTAATTCAATCCGTCAAAAAGGCGCAGTACGTCACCGGATTTTTA TTATTGCTGATGATGAAGAAAAAGAGCCTTATCATGTAAAGCTGCTGGAACGAGAGAATTACTTTGCAATTCAAGGTTAT GCTAACTCCAAATGTTTAGATTTAGCTAATAGAGAAAGAACCTTTGCGTATCTTCGCGCTCAAAATGTAGATGAAGTTTT TATTGCTTGGGATACCATCAAAAATCGGTTGTTCCTTTGCTGGTATTTCTACAATGCTGGCATTACCTTGCGCTTATTGC CAACAATGAGTGAATTTTCTCTCCCTAAATCTACGTTTGATATGATTGGAGAGGTCTTTTATCCCACAATCCCCGCACCC TTAATTGTTGGCGGTGATTTTTGGATGAAGCGATTTTTTGATCTTTGCTTTTCTTCCATCCTCATCATCTTGCTTTTACC CGTATATGTGGCGATCGCTTTGATAATCAAGTTTGATTCTCCTGGGCCGGTATTCTTCAAACAAGAACGTGTTGGCTTAC ATCGCCAAACCTTCAAGATTTGGAAATTCCGGACAATGGTGACAAATGCGGAAAAAATTCAAGCCTCTCTAGAAGCTAAA AACGAAATGAAAGATGGTGTGTTTTTCAAAATGAAAGACGACCCTCGCATCACAACAGTTGGTAAATTCTTACGCCGCTA TAGTTTGGATGAATTGCCACAATTATTTAATGTGTTCTTGGGAGAAATGAGCCTTGTCGGGCCTCGTCCTTTACCGATGC GCGATGTTCAGAAGTTTCAGAATAATCATTTTATTCGCCAAGAAGTTCTTCCTGGTATCACTGGTTTGTGGCAGGTTTCT GGACGTTCCAACATTGATAATTTTGATGACGCATTCAAACTAGATATGGACTATATCGAAAATTGGTCTATCTGGCTAGA TTGGAGAATCTTGTTACAAACCTTTAAGGTTGTGATTCAGAAGACAGGCGCACATTGA
Upstream 100 bases:
>100_bases TATACTTATGGTTTCTGGTAACATTTCTATAGAAAGTTTAAAACCAGACTTACGCTCTGCTAACAGTCCCAGAATCCAGA GGGGATTGTTTATCAGATTA
Downstream 100 bases:
>100_bases TTTGAATCAACATCAAGGTTTTGAATAAGGGGTGTAGGTGTTAAAAAGGCTTACACCCTTTTAAAATTTGGGTCTATAGC TCTAGCTGGTAAAGAGGAGA
Product: glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MRVVILVFLDAVFIASAWNLAVLSSNSIELFSIQNISFMLLNLSLAIAIFQTTGLYKAGIHRRNYAGIVKAISLSSVLLL FVEVLYGENTYIPYATFLVHWLLSISFICSFRYLFNFFTNSIRQKGAVRHRIFIIADDEEKEPYHVKLLERENYFAIQGY ANSKCLDLANRERTFAYLRAQNVDEVFIAWDTIKNRLFLCWYFYNAGITLRLLPTMSEFSLPKSTFDMIGEVFYPTIPAP LIVGGDFWMKRFFDLCFSSILIILLLPVYVAIALIIKFDSPGPVFFKQERVGLHRQTFKIWKFRTMVTNAEKIQASLEAK NEMKDGVFFKMKDDPRITTVGKFLRRYSLDELPQLFNVFLGEMSLVGPRPLPMRDVQKFQNNHFIRQEVLPGITGLWQVS GRSNIDNFDDAFKLDMDYIENWSIWLDWRILLQTFKVVIQKTGAH
Sequences:
>Translated_445_residues MRVVILVFLDAVFIASAWNLAVLSSNSIELFSIQNISFMLLNLSLAIAIFQTTGLYKAGIHRRNYAGIVKAISLSSVLLL FVEVLYGENTYIPYATFLVHWLLSISFICSFRYLFNFFTNSIRQKGAVRHRIFIIADDEEKEPYHVKLLERENYFAIQGY ANSKCLDLANRERTFAYLRAQNVDEVFIAWDTIKNRLFLCWYFYNAGITLRLLPTMSEFSLPKSTFDMIGEVFYPTIPAP LIVGGDFWMKRFFDLCFSSILIILLLPVYVAIALIIKFDSPGPVFFKQERVGLHRQTFKIWKFRTMVTNAEKIQASLEAK NEMKDGVFFKMKDDPRITTVGKFLRRYSLDELPQLFNVFLGEMSLVGPRPLPMRDVQKFQNNHFIRQEVLPGITGLWQVS GRSNIDNFDDAFKLDMDYIENWSIWLDWRILLQTFKVVIQKTGAH >Mature_445_residues MRVVILVFLDAVFIASAWNLAVLSSNSIELFSIQNISFMLLNLSLAIAIFQTTGLYKAGIHRRNYAGIVKAISLSSVLLL FVEVLYGENTYIPYATFLVHWLLSISFICSFRYLFNFFTNSIRQKGAVRHRIFIIADDEEKEPYHVKLLERENYFAIQGY ANSKCLDLANRERTFAYLRAQNVDEVFIAWDTIKNRLFLCWYFYNAGITLRLLPTMSEFSLPKSTFDMIGEVFYPTIPAP LIVGGDFWMKRFFDLCFSSILIILLLPVYVAIALIIKFDSPGPVFFKQERVGLHRQTFKIWKFRTMVTNAEKIQASLEAK NEMKDGVFFKMKDDPRITTVGKFLRRYSLDELPQLFNVFLGEMSLVGPRPLPMRDVQKFQNNHFIRQEVLPGITGLWQVS GRSNIDNFDDAFKLDMDYIENWSIWLDWRILLQTFKVVIQKTGAH
Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=242, Percent_Identity=36.7768595041322, Blast_Score=149, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 51749; Mature: 51749
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVILVFLDAVFIASAWNLAVLSSNSIELFSIQNISFMLLNLSLAIAIFQTTGLYKAGI CEEEEEEHHHHHHHHCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHCC HRRNYAGIVKAISLSSVLLLFVEVLYGENTYIPYATFLVHWLLSISFICSFRYLFNFFTN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIRQKGAVRHRIFIIADDEEKEPYHVKLLERENYFAIQGYANSKCLDLANRERTFAYLRA HHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCHHHCCCCCHHEEEEEC QNVDEVFIAWDTIKNRLFLCWYFYNAGITLRLLPTMSEFSLPKSTFDMIGEVFYPTIPAP CCCCEEEEEEEHHCCCEEEEEEEECCCEEEEEECCHHHHCCCHHHHHHHHHHHCCCCCCC LIVGGDFWMKRFFDLCFSSILIILLLPVYVAIALIIKFDSPGPVFFKQERVGLHRQTFKI EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHCCCHHHHHHH WKFRTMVTNAEKIQASLEAKNEMKDGVFFKMKDDPRITTVGKFLRRYSLDELPQLFNVFL HHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH GEMSLVGPRPLPMRDVQKFQNNHFIRQEVLPGITGLWQVSGRSNIDNFDDAFKLDMDYIE CCHHCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCCCCHHHEECHHHHC NWSIWLDWRILLQTFKVVIQKTGAH CCEEEEHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVVILVFLDAVFIASAWNLAVLSSNSIELFSIQNISFMLLNLSLAIAIFQTTGLYKAGI CEEEEEEHHHHHHHHCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHCC HRRNYAGIVKAISLSSVLLLFVEVLYGENTYIPYATFLVHWLLSISFICSFRYLFNFFTN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIRQKGAVRHRIFIIADDEEKEPYHVKLLERENYFAIQGYANSKCLDLANRERTFAYLRA HHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCHHHCCCCCHHEEEEEC QNVDEVFIAWDTIKNRLFLCWYFYNAGITLRLLPTMSEFSLPKSTFDMIGEVFYPTIPAP CCCCEEEEEEEHHCCCEEEEEEEECCCEEEEEECCHHHHCCCHHHHHHHHHHHCCCCCCC LIVGGDFWMKRFFDLCFSSILIILLLPVYVAIALIIKFDSPGPVFFKQERVGLHRQTFKI EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHCCCHHHHHHH WKFRTMVTNAEKIQASLEAKNEMKDGVFFKMKDDPRITTVGKFLRRYSLDELPQLFNVFL HHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH GEMSLVGPRPLPMRDVQKFQNNHFIRQEVLPGITGLWQVSGRSNIDNFDDAFKLDMDYIE CCHHCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCCCCHHHEECHHHHC NWSIWLDWRILLQTFKVVIQKTGAH CCEEEEHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8355611; 10913080; 11773119; 12354221 [H]