Click here to switch to the map view.

The map label for this gene is 17231885

Identifier: 17231885

GI number: 17231885

Start: 5266414

End: 5267904

Strand: Direct

Name: 17231885

Synonym: alr4393

Alternate gene names: NA

Gene position: 5266414-5267904 (Clockwise)

Preceding gene: 17231884

Following gene: 17231886

Centisome position: 82.11

GC content: 42.39

Gene sequence:

>1491_bases
ATGACCACTGGGTACATCCTCATAGCAGCAATTTTAATTTTGGGAGGTGTAATTGCCACTGTTGGCGATCGCATCGGCAC
AAGAGTTGGCAAAGCACGCCTCTCTCTGTTTAATCTACGCCCCAAAAACACGGCTGTACTGGTGACAATTTTGACAGGAG
GACTAGTTTCAGCAACTACCTTGGCAATCTTATTCATTGCTGACGAAGGACTACGTAAAGGGGTTTTCGAGTTAGAAGAT
ATTCAAAAAGACCTCAGGCAAAAACGAGAACAGCTCAAAGTCGCAGAAGAGCAAAAAACTCAGGTGGAAATTGAACGTAA
TAAAGTTAATCAAGAGCTAGAAACCACCAGAACAGATAAAAAACAGGTAGAAACTCAGCGCGACCAAGCCAAAAAAGAAA
AATTAAAAGCACAGCAAGATTTAGCGCAAACCCAAGCACAATACCAGCGCACCCAAAGCCGACTGGGACAAGTAGTTACA
CAATATCAAAAAGCGATCGCTGAACTGCAAAGCGTTTACAATCAAAGAAAAGCCTTACAAGGGGCAGTGGAACAACTCAA
GACAGAACGCCGCAGGTTATATGCTGAAGCTAAAAAAGCCATAGAACAACGGGACAGAGAACTAGCTAACCGTCAACAAG
CGATAGAACAACGGGACAGAGAACTAGCTAACCGTCAACAAGCACTACAACAGCGCGACCAGAAAATTTCCCAACTAGAT
AAAATAATTCAAAATCGTAACTTGGAAATTGCACAGCGAGAAGAGGTAATTGCCAAACGAGAGTCACGGCTCAAAGAATT
AGAAACACAACAGGACTATTTAGAGCAGGAAGTGGCGCGGCTGGAGAAATATTACCAGTCATACCGCGACTTACGTTTAG
GCAAACTAGCATTAGTTCGCGGTCAAGTTTTGGCCTCTGCTGTTATTCGGACTAATCAGGTAGCGGCTACACGTCAGATA
ATTATCCAACTACTGCAAGAAGCTAACCGCAACGCCAGTTTAGAATTAAGCGAACCTGGGTCAAACTCGGCAAATATAGA
ACTACTACGTATTACCCCAGATAGAATTGAGCAGCTGATTCAGCAAATTAATGATGGTCGAGAATATGTAGTCAGAATAT
TCTCAGCTGGTAATTACGTCAGAGGAGAAAACCAGATAGAATTTTTTGCTGATACAGCTAGAAATGTGCTGGTATTTTCT
GGAAGTGAAGTTTTGGCTACAACTACAGCCGATCCTCGTAGTATGACCTCTTATCAATTACGACAACGGTTAGATTTATT
AATTTCCGCTTCCCAATTTCGTGCTAGGAATGCGGGAATTGTTGAAGGTGTGCAAATAGATGGTACTTTTCTGCGCTTCG
TTTCCTTGTTGCGTCAGTTAGATCAACCAATAGAAATTAAAGCGATCGCTGCTGAAGATACTTATACAGCAGGGCCATTG
AGAGTGCGATTGGTAGCAATCCAAAATGGCAAAGTTATTTTGAGTACTTAA

Upstream 100 bases:

>100_bases
CGAAAATCTTGAGTAACTTCAGCTATTCCCACCCTCCCATCCTCCACAAAGAATGATTGAAAGTAGTAGGCTGTATCTGG
ACTCAATTGGGTAGCTGAAG

Downstream 100 bases:

>100_bases
ATGAAAAAATTAGGGAGTGAGCAATTCAAAATATTAAATAACTGCCAAGGATTAAGGGTAACGAGAGAGTTGTGTAATTA
AAATACTAGAAATATATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTTGYILIAAILILGGVIATVGDRIGTRVGKARLSLFNLRPKNTAVLVTILTGGLVSATTLAILFIADEGLRKGVFELED
IQKDLRQKREQLKVAEEQKTQVEIERNKVNQELETTRTDKKQVETQRDQAKKEKLKAQQDLAQTQAQYQRTQSRLGQVVT
QYQKAIAELQSVYNQRKALQGAVEQLKTERRRLYAEAKKAIEQRDRELANRQQAIEQRDRELANRQQALQQRDQKISQLD
KIIQNRNLEIAQREEVIAKRESRLKELETQQDYLEQEVARLEKYYQSYRDLRLGKLALVRGQVLASAVIRTNQVAATRQI
IIQLLQEANRNASLELSEPGSNSANIELLRITPDRIEQLIQQINDGREYVVRIFSAGNYVRGENQIEFFADTARNVLVFS
GSEVLATTTADPRSMTSYQLRQRLDLLISASQFRARNAGIVEGVQIDGTFLRFVSLLRQLDQPIEIKAIAAEDTYTAGPL
RVRLVAIQNGKVILST

Sequences:

>Translated_496_residues
MTTGYILIAAILILGGVIATVGDRIGTRVGKARLSLFNLRPKNTAVLVTILTGGLVSATTLAILFIADEGLRKGVFELED
IQKDLRQKREQLKVAEEQKTQVEIERNKVNQELETTRTDKKQVETQRDQAKKEKLKAQQDLAQTQAQYQRTQSRLGQVVT
QYQKAIAELQSVYNQRKALQGAVEQLKTERRRLYAEAKKAIEQRDRELANRQQAIEQRDRELANRQQALQQRDQKISQLD
KIIQNRNLEIAQREEVIAKRESRLKELETQQDYLEQEVARLEKYYQSYRDLRLGKLALVRGQVLASAVIRTNQVAATRQI
IIQLLQEANRNASLELSEPGSNSANIELLRITPDRIEQLIQQINDGREYVVRIFSAGNYVRGENQIEFFADTARNVLVFS
GSEVLATTTADPRSMTSYQLRQRLDLLISASQFRARNAGIVEGVQIDGTFLRFVSLLRQLDQPIEIKAIAAEDTYTAGPL
RVRLVAIQNGKVILST
>Mature_495_residues
TTGYILIAAILILGGVIATVGDRIGTRVGKARLSLFNLRPKNTAVLVTILTGGLVSATTLAILFIADEGLRKGVFELEDI
QKDLRQKREQLKVAEEQKTQVEIERNKVNQELETTRTDKKQVETQRDQAKKEKLKAQQDLAQTQAQYQRTQSRLGQVVTQ
YQKAIAELQSVYNQRKALQGAVEQLKTERRRLYAEAKKAIEQRDRELANRQQAIEQRDRELANRQQALQQRDQKISQLDK
IIQNRNLEIAQREEVIAKRESRLKELETQQDYLEQEVARLEKYYQSYRDLRLGKLALVRGQVLASAVIRTNQVAATRQII
IQLLQEANRNASLELSEPGSNSANIELLRITPDRIEQLIQQINDGREYVVRIFSAGNYVRGENQIEFFADTARNVLVFSG
SEVLATTTADPRSMTSYQLRQRLDLLISASQFRARNAGIVEGVQIDGTFLRFVSLLRQLDQPIEIKAIAAEDTYTAGPLR
VRLVAIQNGKVILST

Specific function: Unknown

COG id: COG4372

COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4393_NOSS1 (Q05070)

Other databases:

- EMBL:   BA000019
- EMBL:   L10036
- PIR:   AI2354
- RefSeq:   NP_488433.1
- ProteinModelPortal:   Q05070
- STRING:   Q05070
- GeneID:   1107994
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr4393
- NMPDR:   fig|103690.1.peg.4700
- eggNOG:   COG4372
- HOGENOM:   HBG634473
- OMA:   SLFNLRP
- ProtClustDB:   CLSK893080
- BioCyc:   NSP103690:ALR4393-MONOMER
- InterPro:   IPR021435

Pfam domain/function: PF11283 DUF3084

EC number: NA

Molecular weight: Translated: 56376; Mature: 56245

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS00036 BZIP_BASIC

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfb61e1c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGYILIAAILILGGVIATVGDRIGTRVGKARLSLFNLRPKNTAVLVTILTGGLVSATT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHCCHHHHHH
LAILFIADEGLRKGVFELEDIQKDLRQKREQLKVAEEQKTQVEIERNKVNQELETTRTDK
HHHHHEECCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVETQRDQAKKEKLKAQQDLAQTQAQYQRTQSRLGQVVTQYQKAIAELQSVYNQRKALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVEQLKTERRRLYAEAKKAIEQRDRELANRQQAIEQRDRELANRQQALQQRDQKISQLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIQNRNLEIAQREEVIAKRESRLKELETQQDYLEQEVARLEKYYQSYRDLRLGKLALVR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQVLASAVIRTNQVAATRQIIIQLLQEANRNASLELSEPGSNSANIELLRITPDRIEQLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECHHHHHHHH
QQINDGREYVVRIFSAGNYVRGENQIEFFADTARNVLVFSGSEVLATTTADPRSMTSYQL
HHHCCCHHHHHHHHHCCCEECCCCCHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHH
RQRLDLLISASQFRARNAGIVEGVQIDGTFLRFVSLLRQLDQPIEIKAIAAEDTYTAGPL
HHHHHHHHHHHHHHCCCCCCEECEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCE
RVRLVAIQNGKVILST
EEEEEEEECCEEEEEH
>Mature Secondary Structure 
TTGYILIAAILILGGVIATVGDRIGTRVGKARLSLFNLRPKNTAVLVTILTGGLVSATT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHCCHHHHHH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EEEEEEEECCEEEEEH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840; 8391534