| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231859
Identifier: 17231859
GI number: 17231859
Start: 5232310
End: 5232876
Strand: Reverse
Name: 17231859
Synonym: all4367
Alternate gene names: NA
Gene position: 5232876-5232310 (Counterclockwise)
Preceding gene: 17231861
Following gene: 17231857
Centisome position: 81.59
GC content: 44.09
Gene sequence:
>567_bases ATGCTAAAGTCAATTTCTAGCGTGGCAATGACATTGATCGGATTCAGCACTAGTCTAATGTTCCCTCACATTGCAGTTGC TGAAGAGATTTCCTGCCAAAGAAGGCTAGGTGCAATCACCGTTGATAATGTGAAAGTACCTCAAGGTAAAACCTGCACCC TCGCTGGAACTACCGTCAAAGGAAATATCGTAGTCGAAGGCGGCGCAACTCTCAAGGCCATAGGTGCGAAAGTCAATGGT AGTATTCAGGCAGAGGGTGCAAGTCTAGTAGATGTAAATTCTAATACCACCGTCGGTGGAAGCATCCAAGTGAAGCAAGG TCGTGCGGCTCGTGTGGTGAGTACAAGCATCGATGGAGATTTGCAGTTGGAGTCGAACTCAAGACAAATAGTTGCTAATC AAAACCAAATTGACGGCAATTTACAAGTCTTTCAAAATACTGGAGGGGTAATGATTCGGCAAAATCGCGTTAAGGGCAAT TTGCAGTGTAAAGAAAATACTCCTCAGCCGATTGGTGGTGACAATATTGTCCAAGGTAGTAAAGAAGATCAGTGTGCAAG ATTATAA
Upstream 100 bases:
>100_bases TAAAGCCTCTCTCCTTGCAGGGGAGAGGTTTGGAGAGGGGTTTCAAAAATAAGTTGCACAACGCGTTAACTATCAACTTT TACCACAACCTAAACCAGTT
Downstream 100 bases:
>100_bases GAAGTTACTCTAATACCTGATTAGCAAACTTTGCTCCACTATACTGTGATTCAAAAAAGGGAACAGATAGGTAGTATGTA ATACTCCATACTACCTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRRLGAITVDNVKVPQGKTCTLAGTTVKGNIVVEGGATLKAIGAKVNG SIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTSIDGDLQLESNSRQIVANQNQIDGNLQVFQNTGGVMIRQNRVKGN LQCKENTPQPIGGDNIVQGSKEDQCARL
Sequences:
>Translated_188_residues MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRRLGAITVDNVKVPQGKTCTLAGTTVKGNIVVEGGATLKAIGAKVNG SIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTSIDGDLQLESNSRQIVANQNQIDGNLQVFQNTGGVMIRQNRVKGN LQCKENTPQPIGGDNIVQGSKEDQCARL >Mature_188_residues MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRRLGAITVDNVKVPQGKTCTLAGTTVKGNIVVEGGATLKAIGAKVNG SIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTSIDGDLQLESNSRQIVANQNQIDGNLQVFQNTGGVMIRQNRVKGN LQCKENTPQPIGGDNIVQGSKEDQCARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19663; Mature: 19663
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRRLGAITVDNVKVPQGKTCTLAGTTVK CCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCEEEECCEECCCCCEEEEECCEEE GNIVVEGGATLKAIGAKVNGSIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTSIDGD CCEEEECCCEEEEECEEECCEEEECCCEEEEECCCCEECCEEEECCCCEEEEEEECCCCE LQLESNSRQIVANQNQIDGNLQVFQNTGGVMIRQNRVKGNLQCKENTPQPIGGDNIVQGS EEECCCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCC KEDQCARL CCCCCCCC >Mature Secondary Structure MLKSISSVAMTLIGFSTSLMFPHIAVAEEISCQRRLGAITVDNVKVPQGKTCTLAGTTVK CCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCEEEECCEECCCCCEEEEECCEEE GNIVVEGGATLKAIGAKVNGSIQAEGASLVDVNSNTTVGGSIQVKQGRAARVVSTSIDGD CCEEEECCCEEEEECEEECCEEEECCCEEEEECCCCEECCEEEECCCCEEEEEEECCCCE LQLESNSRQIVANQNQIDGNLQVFQNTGGVMIRQNRVKGNLQCKENTPQPIGGDNIVQGS EEECCCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCC KEDQCARL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA