| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231854
Identifier: 17231854
GI number: 17231854
Start: 5224207
End: 5224455
Strand: Reverse
Name: 17231854
Synonym: asl4362
Alternate gene names: NA
Gene position: 5224455-5224207 (Counterclockwise)
Preceding gene: 17231856
Following gene: 17231853
Centisome position: 81.46
GC content: 33.73
Gene sequence:
>249_bases ATGAGTCAAATAGATAAACTACTGGCTAAGATATTATCAGGAACATCAGACAAAAACATTGCCTTTGAGCAGTTGTGTCA ACTACTAATTAAACTAGGGTTTGATGAGCGCATTCGCGGTAGCCATCATATATATACAAAAGATGGTATAGAAGAAATCT TGAATCTTCAGTCCAAACAAGGAAAAGCTAAAGCTTATCAGGTAAAGCAAGTTCGTGAAGTAATTATTAAATATGAACTA GGAGAATAA
Upstream 100 bases:
>100_bases AACCACTCTGGAAGAGCCTAATTACTTAAAGAATAATATTAAAGACTAATATTATATGTCACCAGTAAAAACCGTAAATT TATCCAAAATTTTATAGTCG
Downstream 100 bases:
>100_bases GATGAATCTGCGTTATGAAATTAATCTCTATTGGTGTGAAGAAGATCAAGCATTTATAGCCGAAGTACCAGAGTTACCTG GATGTGCTGCTGATGGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSQIDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSHHIYTKDGIEEILNLQSKQGKAKAYQVKQVREVIIKYEL GE
Sequences:
>Translated_82_residues MSQIDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSHHIYTKDGIEEILNLQSKQGKAKAYQVKQVREVIIKYEL GE >Mature_81_residues SQIDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSHHIYTKDGIEEILNLQSKQGKAKAYQVKQVREVIIKYELG E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9375; Mature: 9244
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSHHIYTKDGIEEILNLQSKQ CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCC GKAKAYQVKQVREVIIKYELGE CCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQIDKLLAKILSGTSDKNIAFEQLCQLLIKLGFDERIRGSHHIYTKDGIEEILNLQSKQ CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCC GKAKAYQVKQVREVIIKYELGE CCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA