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The map label for this gene is dnaJ [H]

Identifier: 17231847

GI number: 17231847

Start: 5218615

End: 5219238

Strand: Reverse

Name: dnaJ [H]

Synonym: all4355

Alternate gene names: 17231847

Gene position: 5219238-5218615 (Counterclockwise)

Preceding gene: 17231848

Following gene: 17231845

Centisome position: 81.38

GC content: 44.39

Gene sequence:

>624_bases
ATGGATCTCGGAGATTGCTACCGTTTATTGGGTTTAAGGTCGGGAGCTTCATTTGCTGATATTAAAGCCTCTTACCGAAG
GCTGGCGCAGCAATATCATCCTGATATCAACCCTACTGATAAAAAAGCTCAAGATAAGTTTATTGCCTTGACCGAGGCTT
ACAGATTTCTGTTGACGGTAGTACCTCCAGAGGACACAGCGCAAAAGTCAAAGCAATCACCTACCTCTAGTAGTGAAAAT
ATCAAAGCAACTCACCAAGAGAAAGCGCCTACGGCTACCGTCACAGATGAAAAGCCGTCTCCATCAAAACCACCAAACAT
TATAGAAATCGAACAACGGTTAAAGTGGAAGACCTATGAACAACTGCAACGGTTTTTGCGGGAAAGAAGATTTCCCCAAG
CGATCGCCTTAGCAGAAGCTTTAGCCGCCCGTTTACCGAAAGATCCAGAAGTACGCCAATGGCAAGCGATCGCCTATCAA
ATCTGGGGACGCGCCCTCATTAACGAAAATCAACTCCTCAAAGCCAGAGTCTATCTCAAAAAAGCCTTAAAAACTGACCC
CCATAACAAAGCATTATGGGAAGAAGTACAGCGCGATTTCCAAAAGTTGGAACAGATATTTTGA

Upstream 100 bases:

>100_bases
AAATGTGAACTATAAATTATAAGATTATTGTTTATTATTAAAACTTTCAGCAAAAAGCTCGTCGCTGATGGCTGAATATT
ACAGAATTAAGTAGATCAAA

Downstream 100 bases:

>100_bases
GAGGATTCAACAGTTAACTGTTAACTGTTAACTGTCAACCGGTTCTTATTTTTCAGCGTGGACATAATCTACAAAGTAAA
ATTTCGGAACCAGCCAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDLGDCYRLLGLRSGASFADIKASYRRLAQQYHPDINPTDKKAQDKFIALTEAYRFLLTVVPPEDTAQKSKQSPTSSSEN
IKATHQEKAPTATVTDEKPSPSKPPNIIEIEQRLKWKTYEQLQRFLRERRFPQAIALAEALAARLPKDPEVRQWQAIAYQ
IWGRALINENQLLKARVYLKKALKTDPHNKALWEEVQRDFQKLEQIF

Sequences:

>Translated_207_residues
MDLGDCYRLLGLRSGASFADIKASYRRLAQQYHPDINPTDKKAQDKFIALTEAYRFLLTVVPPEDTAQKSKQSPTSSSEN
IKATHQEKAPTATVTDEKPSPSKPPNIIEIEQRLKWKTYEQLQRFLRERRFPQAIALAEALAARLPKDPEVRQWQAIAYQ
IWGRALINENQLLKARVYLKKALKTDPHNKALWEEVQRDFQKLEQIF
>Mature_207_residues
MDLGDCYRLLGLRSGASFADIKASYRRLAQQYHPDINPTDKKAQDKFIALTEAYRFLLTVVPPEDTAQKSKQSPTSSSEN
IKATHQEKAPTATVTDEKPSPSKPPNIIEIEQRLKWKTYEQLQRFLRERRFPQAIALAEALAARLPKDPEVRQWQAIAYQ
IWGRALINENQLLKARVYLKKALKTDPHNKALWEEVQRDFQKLEQIF

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI7706495, Length=82, Percent_Identity=43.9024390243902, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 23960; Mature: 23960

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGDCYRLLGLRSGASFADIKASYRRLAQQYHPDINPTDKKAQDKFIALTEAYRFLLTV
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
VPPEDTAQKSKQSPTSSSENIKATHQEKAPTATVTDEKPSPSKPPNIIEIEQRLKWKTYE
CCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHH
QLQRFLRERRFPQAIALAEALAARLPKDPEVRQWQAIAYQIWGRALINENQLLKARVYLK
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KALKTDPHNKALWEEVQRDFQKLEQIF
HHHCCCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDLGDCYRLLGLRSGASFADIKASYRRLAQQYHPDINPTDKKAQDKFIALTEAYRFLLTV
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
VPPEDTAQKSKQSPTSSSENIKATHQEKAPTATVTDEKPSPSKPPNIIEIEQRLKWKTYE
CCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHH
QLQRFLRERRFPQAIALAEALAARLPKDPEVRQWQAIAYQIWGRALINENQLLKARVYLK
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KALKTDPHNKALWEEVQRDFQKLEQIF
HHHCCCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA