| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231757
Identifier: 17231757
GI number: 17231757
Start: 5114612
End: 5115283
Strand: Reverse
Name: 17231757
Synonym: all4265
Alternate gene names: NA
Gene position: 5115283-5114612 (Counterclockwise)
Preceding gene: 17231758
Following gene: 17231755
Centisome position: 79.75
GC content: 41.82
Gene sequence:
>672_bases GTGCCACAAGGTTCTGAATACATGGCTGTGTGTCGCGGCTTAAGTCGAGTCACTGGTAAAACGCCTAAAATTATACCAGT GCCAGTAGGTAAAAAGCCGTTAACAAAATACCTCCAACAATTGCCAAAGCAGGAATACTCTACCGGTTATTTACAACCAA AAGTCTTGGTTGTGGGTCTATGTGGCAGCTTAACCCCGCAAGATTGTATTGGGAATGTGGTGTTGTATGAAAGTTGTATT TATCAGGAACAATTGCAAATCTGCGATTTTGCTTTCACTATAGAAATACACTCAGCACTAAAAACTCATTATCCAACACT GAAGTTAGTTAAGTCATTGACAAGCGATCGCGTTATTTGCTCTGCTTCAGAAAAACAATATCTTGGCAAAACCTTAGGTG CTGATGTCGTTGATATGGAAGGATTTACTACCCTAGAGTATTTCAATGGATCTGGTGTAGCAGTAGCTATGCTTAGGGTA GTTAGCGATGATTGCCATCACAATATCCCTGACATCACAGCAGCCATCAATCCCGACGGTTCTCTACAACCTTTATCCTT AGCATTAAGATTCCTGGGTCAACCTATTGCAGCCGCTAGGCTAATTCAAGGTTCCCTGCGGGGACTAAAAGTGTTGGAAG AAGTGACAAAATCACTGGTTGCTGAATTGTAA
Upstream 100 bases:
>100_bases AGGCTACGCCAACAAGCTCCCACTAATTGTCTTTAATTTTGAATTTTGAATTTTGAATTTTGAATTGGAGCGAAGCGACT TGACTATCAACACAATTCTT
Downstream 100 bases:
>100_bases TTAACTTGATGGAAAAGATTTCACCCAACCGAGTTGGATAGCCAGATCAAGAGCGATCGCTGCCGTCGCAAACCACAATA TACTTTCACTAGCCATGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPQGSEYMAVCRGLSRVTGKTPKIIPVPVGKKPLTKYLQQLPKQEYSTGYLQPKVLVVGLCGSLTPQDCIGNVVLYESCI YQEQLQICDFAFTIEIHSALKTHYPTLKLVKSLTSDRVICSASEKQYLGKTLGADVVDMEGFTTLEYFNGSGVAVAMLRV VSDDCHHNIPDITAAINPDGSLQPLSLALRFLGQPIAAARLIQGSLRGLKVLEEVTKSLVAEL
Sequences:
>Translated_223_residues MPQGSEYMAVCRGLSRVTGKTPKIIPVPVGKKPLTKYLQQLPKQEYSTGYLQPKVLVVGLCGSLTPQDCIGNVVLYESCI YQEQLQICDFAFTIEIHSALKTHYPTLKLVKSLTSDRVICSASEKQYLGKTLGADVVDMEGFTTLEYFNGSGVAVAMLRV VSDDCHHNIPDITAAINPDGSLQPLSLALRFLGQPIAAARLIQGSLRGLKVLEEVTKSLVAEL >Mature_222_residues PQGSEYMAVCRGLSRVTGKTPKIIPVPVGKKPLTKYLQQLPKQEYSTGYLQPKVLVVGLCGSLTPQDCIGNVVLYESCIY QEQLQICDFAFTIEIHSALKTHYPTLKLVKSLTSDRVICSASEKQYLGKTLGADVVDMEGFTTLEYFNGSGVAVAMLRVV SDDCHHNIPDITAAINPDGSLQPLSLALRFLGQPIAAARLIQGSLRGLKVLEEVTKSLVAEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24256; Mature: 24124
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQGSEYMAVCRGLSRVTGKTPKIIPVPVGKKPLTKYLQQLPKQEYSTGYLQPKVLVVGL CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHCCCCCCHHEEEEEC CGSLTPQDCIGNVVLYESCIYQEQLQICDFAFTIEIHSALKTHYPTLKLVKSLTSDRVIC CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCHHHHHHHHHCCCEEE SASEKQYLGKTLGADVVDMEGFTTLEYFNGSGVAVAMLRVVSDDCHHNIPDITAAINPDG CCHHHHHHHHHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCC SLQPLSLALRFLGQPIAAARLIQGSLRGLKVLEEVTKSLVAEL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQGSEYMAVCRGLSRVTGKTPKIIPVPVGKKPLTKYLQQLPKQEYSTGYLQPKVLVVGL CCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHCCCCCCHHEEEEEC CGSLTPQDCIGNVVLYESCIYQEQLQICDFAFTIEIHSALKTHYPTLKLVKSLTSDRVIC CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCHHHHHHHHHCCCEEE SASEKQYLGKTLGADVVDMEGFTTLEYFNGSGVAVAMLRVVSDDCHHNIPDITAAINPDG CCHHHHHHHHHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCC SLQPLSLALRFLGQPIAAARLIQGSLRGLKVLEEVTKSLVAEL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA