| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231721
Identifier: 17231721
GI number: 17231721
Start: 5064843
End: 5066024
Strand: Direct
Name: 17231721
Synonym: alr4229
Alternate gene names: NA
Gene position: 5064843-5066024 (Clockwise)
Preceding gene: 17231720
Following gene: 17231722
Centisome position: 78.97
GC content: 30.03
Gene sequence:
>1182_bases ATGAATAACAATTACTCTTTTGATGATGATCAAAATTGGTTTGAAGATTACTCTAATGAAGAGGATGATTTTCAAATTGA TGAATATGATTTGACCTCTACACCTAATGATTTTAATGTACTAACAATTTATAATTTTATGGAATCTGGAGCAGTAAAAA TACCTGGATTTCAAAGAAACTACGTTTGGGATTTAAATAGAGCATCAAAACTAATTGAATCCATAATTCTTGGGTTGCCA ATTCCGCAAATATTTCTTTATGAAGAAGATAGAAATAAATTTTTAGTGATTGATGGTCAACAACGTTTAATGTCAATTTA TTATTTTATGAAGCGTAGATTTCCTGTTAAGGAGAAGCGAGTTGAATTAAGGCTGATTTTTGAAAAATTCGGCAAAATTC CTGATGACATACTACACGATAATAATTATTTTATAGATTTTGATTTAAGTCTCCCACAAAAACTTCCTAAACAACCAAAC AAATTTAAAGGTCTTAATTATTATACTTTAGATGATTACAAAACACAGTTCGAGCTTAGGCCTATCCGTAACGTAATAGT TAAACAAAACTTTCCTAAGGATGATGATTCTTCAATATATGAAATTTTTAATCGTTTAAATTCAGGTGGAGTTAATTTAT ATCCACAAGAAATTAGAGCTAGTTTATATCATTCCCCTTTCTATGAGATGCTCAATCGTATCAATATGGAACAAGGATGG CGAGATTTATTACATATGAATGAGCCGGATATTCACATGAAAGATATTGAACTTTTGCTTCGAGGTTTTGCTATGCTGAT TGATGGCGAAGATTATGCTCCCTCACTACCCAAATTTTTAAACAAATTTTCTAGAAAAAGTAGAAATAATTCTCATGAAC AAAATCAATATCTTGAGAATTTATTTAAATCCTTTTTAAAACAATGTGAGTCTTTACCGCAAGAACCATTTATGAAAAAA CGTAATAATCGATTCCATATAGCCCTTTTTGAAGCTGTATTTACTGCAATATGTAAGTCAAAATTCTTGCAAAGACAGCT ATTAGATCACCCTTTAGATATTAATAAAATTAAGCAGCTAGAAAACGATGAGCAATTTGTAAAAGCTTCATCGGAAGGAA CAACAAAGACATCTAACGTAGAAACTCGTTTAGAACGAGCTACAAAAATATTAGGAGAATAG
Upstream 100 bases:
>100_bases ATGTGTAAATATTTACTTTATAATTGACCATTTTAACCCACAATGTATACAATATATTACTAAGCTTTTCAAGTTCCAAT ACCATGATTACAGTATTTAT
Downstream 100 bases:
>100_bases GAGATATTGTAGTGCTTGAAGATACGGGTGTAGATAGACTCTACAAAGAGTTTAAAGATTTAGTAGTATATCTTGAAAAG GATAACGAAATATCACTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNNNYSFDDDQNWFEDYSNEEDDFQIDEYDLTSTPNDFNVLTIYNFMESGAVKIPGFQRNYVWDLNRASKLIESIILGLP IPQIFLYEEDRNKFLVIDGQQRLMSIYYFMKRRFPVKEKRVELRLIFEKFGKIPDDILHDNNYFIDFDLSLPQKLPKQPN KFKGLNYYTLDDYKTQFELRPIRNVIVKQNFPKDDDSSIYEIFNRLNSGGVNLYPQEIRASLYHSPFYEMLNRINMEQGW RDLLHMNEPDIHMKDIELLLRGFAMLIDGEDYAPSLPKFLNKFSRKSRNNSHEQNQYLENLFKSFLKQCESLPQEPFMKK RNNRFHIALFEAVFTAICKSKFLQRQLLDHPLDINKIKQLENDEQFVKASSEGTTKTSNVETRLERATKILGE
Sequences:
>Translated_393_residues MNNNYSFDDDQNWFEDYSNEEDDFQIDEYDLTSTPNDFNVLTIYNFMESGAVKIPGFQRNYVWDLNRASKLIESIILGLP IPQIFLYEEDRNKFLVIDGQQRLMSIYYFMKRRFPVKEKRVELRLIFEKFGKIPDDILHDNNYFIDFDLSLPQKLPKQPN KFKGLNYYTLDDYKTQFELRPIRNVIVKQNFPKDDDSSIYEIFNRLNSGGVNLYPQEIRASLYHSPFYEMLNRINMEQGW RDLLHMNEPDIHMKDIELLLRGFAMLIDGEDYAPSLPKFLNKFSRKSRNNSHEQNQYLENLFKSFLKQCESLPQEPFMKK RNNRFHIALFEAVFTAICKSKFLQRQLLDHPLDINKIKQLENDEQFVKASSEGTTKTSNVETRLERATKILGE >Mature_393_residues MNNNYSFDDDQNWFEDYSNEEDDFQIDEYDLTSTPNDFNVLTIYNFMESGAVKIPGFQRNYVWDLNRASKLIESIILGLP IPQIFLYEEDRNKFLVIDGQQRLMSIYYFMKRRFPVKEKRVELRLIFEKFGKIPDDILHDNNYFIDFDLSLPQKLPKQPN KFKGLNYYTLDDYKTQFELRPIRNVIVKQNFPKDDDSSIYEIFNRLNSGGVNLYPQEIRASLYHSPFYEMLNRINMEQGW RDLLHMNEPDIHMKDIELLLRGFAMLIDGEDYAPSLPKFLNKFSRKSRNNSHEQNQYLENLFKSFLKQCESLPQEPFMKK RNNRFHIALFEAVFTAICKSKFLQRQLLDHPLDINKIKQLENDEQFVKASSEGTTKTSNVETRLERATKILGE
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46867; Mature: 46867
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNYSFDDDQNWFEDYSNEEDDFQIDEYDLTSTPNDFNVLTIYNFMESGAVKIPGFQRN CCCCCCCCCCCHHHHHCCCCCCCCEECCEECCCCCCCCEEEEEEHHHHCCCEECCCCCCC YVWDLNRASKLIESIILGLPIPQIFLYEEDRNKFLVIDGQQRLMSIYYFMKRRFPVKEKR CEECHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCHHHH VELRLIFEKFGKIPDDILHDNNYFIDFDLSLPQKLPKQPNKFKGLNYYTLDDYKTQFELR HHHHHHHHHHCCCCHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCEEEECCCCCCEEHH PIRNVIVKQNFPKDDDSSIYEIFNRLNSGGVNLYPQEIRASLYHSPFYEMLNRINMEQGW HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHH RDLLHMNEPDIHMKDIELLLRGFAMLIDGEDYAPSLPKFLNKFSRKSRNNSHEQNQYLEN HHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH LFKSFLKQCESLPQEPFMKKRNNRFHIALFEAVFTAICKSKFLQRQLLDHPLDINKIKQL HHHHHHHHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ENDEQFVKASSEGTTKTSNVETRLERATKILGE CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNNNYSFDDDQNWFEDYSNEEDDFQIDEYDLTSTPNDFNVLTIYNFMESGAVKIPGFQRN CCCCCCCCCCCHHHHHCCCCCCCCEECCEECCCCCCCCEEEEEEHHHHCCCEECCCCCCC YVWDLNRASKLIESIILGLPIPQIFLYEEDRNKFLVIDGQQRLMSIYYFMKRRFPVKEKR CEECHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCHHHH VELRLIFEKFGKIPDDILHDNNYFIDFDLSLPQKLPKQPNKFKGLNYYTLDDYKTQFELR HHHHHHHHHHCCCCHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCEEEECCCCCCEEHH PIRNVIVKQNFPKDDDSSIYEIFNRLNSGGVNLYPQEIRASLYHSPFYEMLNRINMEQGW HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHH RDLLHMNEPDIHMKDIELLLRGFAMLIDGEDYAPSLPKFLNKFSRKSRNNSHEQNQYLEN HHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH LFKSFLKQCESLPQEPFMKKRNNRFHIALFEAVFTAICKSKFLQRQLLDHPLDINKIKQL HHHHHHHHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ENDEQFVKASSEGTTKTSNVETRLERATKILGE CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA