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The map label for this gene is yadH [H]

Identifier: 17231711

GI number: 17231711

Start: 5055270

End: 5056097

Strand: Reverse

Name: yadH [H]

Synonym: all4219

Alternate gene names: 17231711

Gene position: 5056097-5055270 (Counterclockwise)

Preceding gene: 17231712

Following gene: 17231710

Centisome position: 78.83

GC content: 43.0

Gene sequence:

>828_bases
GTGACATCTCAAAAAGCCTTAATCTGGGGCAAAAAGTTTAAAACCTCACAACTGCAAATCCTGTTAGCTGATAGTCTGAC
TATCTTTTGGGGAGATTGGTTAGATTTACGGGTACGCATAGCCCAAGTAGCTGCATCCGGCTTAATCTCACCACTAATAT
ATATTTTGGCTTTTGGTTTAGGGCTGGGTAGCTCAATTAGGCCAGGTTCCGCCATCAGTGCTAATTACAATAACTATTTA
GAATTTATCTTGCCAGGAATGGTAGCCTTATCTTCCATGACCATTAGCTTTGGTGGGACAACATTCTCGATTTGTGGAGA
TAGATTATTTACCAAAACCTTTGAAGAACTATTACTCACACCCATCCATCCCTTAGCACTGCAATTGGGTAAAATGCTGG
CTGGAGTTGTACGGGGTTTGATGACTTCTGGTTCAGTGATATTGGTAGCCCTGATAATCACGAGAAACTGGAATTTCCTT
CATCCCCTGTTTTTGGTGTTGTTGATATTAAATTGTGCAGTATTTGCAGGTTTGGGTGTAATTGTGGGACTATCGGTGCG
ATCGCTAGAATCGGTAGGACTATACAACAACTTTGTCATTATCCCCATGTCCTTCTTAGGTGCAACCTTCTTCGACCCCA
GTACCTTACCAACAGCATTCCAAGTTATCGTTTATTTATTCCCTTTAACTTATGCCAGTACGGGGCTACGCGCAGCCGCC
AACTTGCCCTTATCTCAGTTCCCTTGGTATAGCATACCTGTCTTACTAGTCATAGCGATCGCCCTTTCTCTTTGGGGTGC
TGCTAAATTTGCCCACCAACAAGACTAA

Upstream 100 bases:

>100_bases
TATATTTTGGGCATAACGTAGAGAAATTTTATTAAAACTTTGAGATGCCAAAAAATGTAAAGTAATATTTACAACGAATT
TGATACCTGACTAAAAAAAA

Downstream 100 bases:

>100_bases
TAGAACTTACGCATGAAAACGAAAGATCGAGGGTTTGGACAAGGGTGTAGGGGTATAAGGGTATAAATGCTTGAAACCCT
TACACCCCTGTACCCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTSQKALIWGKKFKTSQLQILLADSLTIFWGDWLDLRVRIAQVAASGLISPLIYILAFGLGLGSSIRPGSAISANYNNYL
EFILPGMVALSSMTISFGGTTFSICGDRLFTKTFEELLLTPIHPLALQLGKMLAGVVRGLMTSGSVILVALIITRNWNFL
HPLFLVLLILNCAVFAGLGVIVGLSVRSLESVGLYNNFVIIPMSFLGATFFDPSTLPTAFQVIVYLFPLTYASTGLRAAA
NLPLSQFPWYSIPVLLVIAIALSLWGAAKFAHQQD

Sequences:

>Translated_275_residues
MTSQKALIWGKKFKTSQLQILLADSLTIFWGDWLDLRVRIAQVAASGLISPLIYILAFGLGLGSSIRPGSAISANYNNYL
EFILPGMVALSSMTISFGGTTFSICGDRLFTKTFEELLLTPIHPLALQLGKMLAGVVRGLMTSGSVILVALIITRNWNFL
HPLFLVLLILNCAVFAGLGVIVGLSVRSLESVGLYNNFVIIPMSFLGATFFDPSTLPTAFQVIVYLFPLTYASTGLRAAA
NLPLSQFPWYSIPVLLVIAIALSLWGAAKFAHQQD
>Mature_274_residues
TSQKALIWGKKFKTSQLQILLADSLTIFWGDWLDLRVRIAQVAASGLISPLIYILAFGLGLGSSIRPGSAISANYNNYLE
FILPGMVALSSMTISFGGTTFSICGDRLFTKTFEELLLTPIHPLALQLGKMLAGVVRGLMTSGSVILVALIITRNWNFLH
PLFLVLLILNCAVFAGLGVIVGLSVRSLESVGLYNNFVIIPMSFLGATFFDPSTLPTAFQVIVYLFPLTYASTGLRAAAN
LPLSQFPWYSIPVLLVIAIALSLWGAAKFAHQQD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=245, Percent_Identity=25.7142857142857, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29834; Mature: 29703

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQKALIWGKKFKTSQLQILLADSLTIFWGDWLDLRVRIAQVAASGLISPLIYILAFGL
CCCCCCEEECCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGSSIRPGSAISANYNNYLEFILPGMVALSSMTISFGGTTFSICGDRLFTKTFEELLLT
CCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHC
PIHPLALQLGKMLAGVVRGLMTSGSVILVALIITRNWNFLHPLFLVLLILNCAVFAGLGV
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IVGLSVRSLESVGLYNNFVIIPMSFLGATFFDPSTLPTAFQVIVYLFPLTYASTGLRAAA
HHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
NLPLSQFPWYSIPVLLVIAIALSLWGAAKFAHQQD
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSQKALIWGKKFKTSQLQILLADSLTIFWGDWLDLRVRIAQVAASGLISPLIYILAFGL
CCCCCEEECCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGSSIRPGSAISANYNNYLEFILPGMVALSSMTISFGGTTFSICGDRLFTKTFEELLLT
CCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHC
PIHPLALQLGKMLAGVVRGLMTSGSVILVALIITRNWNFLHPLFLVLLILNCAVFAGLGV
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IVGLSVRSLESVGLYNNFVIIPMSFLGATFFDPSTLPTAFQVIVYLFPLTYASTGLRAAA
HHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
NLPLSQFPWYSIPVLLVIAIALSLWGAAKFAHQQD
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]