| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231676
Identifier: 17231676
GI number: 17231676
Start: 5033924
End: 5034529
Strand: Reverse
Name: 17231676
Synonym: all4184
Alternate gene names: NA
Gene position: 5034529-5033924 (Counterclockwise)
Preceding gene: 17231677
Following gene: 17231675
Centisome position: 78.5
GC content: 38.61
Gene sequence:
>606_bases ATGTTTAAACCGTCTGTGAGTAACAGGCGGTTTTTGTTTTGCTTCACGCAGAAAAGCACTTACGCACCCAAGTTGTCTGT GATTTTATATCCAAGCAGAAGTATAGACACAGGAGATATTAAGCATTATCGAGAATTTTTTATTAGTGAGCGAGTCAGGC GAATTTATCTGGATGAATTAATAGATGCGACTTCCTTACCAATTAGTCTGGCTACTGTCAAATTGATCGTGACATCTGAA GATACAGCCATTGTAGAAGCCAGGAAGTTGATAGCCAGAACAAAATCAGAAATCAACTTACCAGCTAAACAAAAGGAATT CTTAGAATTGATAGAGACTATCATTTTATATAAGTTGCCCTCAATTAGTAAGAAGGAGTTAGAAGAAATGTTTAGCCTCA GTGACTTAAGAAATACTAGATATTTTCAGGATGTTTTTCAAGAAGGCAAAGAAGAAGGTGAGCGCAGTGGCAAGCTAAAA GCAGTACCAGCAATGTTGGCAGCAGGTTTGACTTTAGAGCAAGTGGCACAAGCTTTAGATTTAAGTGTTGAGGAAGTACG ACAAGCCACACAACAGCAGTCTTCTGACTCTCAAAGCGGCAATTAA
Upstream 100 bases:
>100_bases AGAGACGGTCATTCAATCTTGTATTTCTCAAGACCAGCAGGAACGGTTGGCGGAGTTAGCAACTTCTAGCGCTGCTGGTT AATTATTAGTTTAATAAATT
Downstream 100 bases:
>100_bases ACAAGCTCACTTTACTCTTTTGTTTGGTAAGAGTTTCTTAAGACAAATTATTGGTTAATTTTTGTTAATATTGGACACAG TATTGGTACTTCGTCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MFKPSVSNRRFLFCFTQKSTYAPKLSVILYPSRSIDTGDIKHYREFFISERVRRIYLDELIDATSLPISLATVKLIVTSE DTAIVEARKLIARTKSEINLPAKQKEFLELIETIILYKLPSISKKELEEMFSLSDLRNTRYFQDVFQEGKEEGERSGKLK AVPAMLAAGLTLEQVAQALDLSVEEVRQATQQQSSDSQSGN
Sequences:
>Translated_201_residues MFKPSVSNRRFLFCFTQKSTYAPKLSVILYPSRSIDTGDIKHYREFFISERVRRIYLDELIDATSLPISLATVKLIVTSE DTAIVEARKLIARTKSEINLPAKQKEFLELIETIILYKLPSISKKELEEMFSLSDLRNTRYFQDVFQEGKEEGERSGKLK AVPAMLAAGLTLEQVAQALDLSVEEVRQATQQQSSDSQSGN >Mature_201_residues MFKPSVSNRRFLFCFTQKSTYAPKLSVILYPSRSIDTGDIKHYREFFISERVRRIYLDELIDATSLPISLATVKLIVTSE DTAIVEARKLIARTKSEINLPAKQKEFLELIETIILYKLPSISKKELEEMFSLSDLRNTRYFQDVFQEGKEEGERSGKLK AVPAMLAAGLTLEQVAQALDLSVEEVRQATQQQSSDSQSGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22860; Mature: 22860
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKPSVSNRRFLFCFTQKSTYAPKLSVILYPSRSIDTGDIKHYREFFISERVRRIYLDEL CCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IDATSLPISLATVKLIVTSEDTAIVEARKLIARTKSEINLPAKQKEFLELIETIILYKLP HHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC SISKKELEEMFSLSDLRNTRYFQDVFQEGKEEGERSGKLKAVPAMLAAGLTLEQVAQALD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHC LSVEEVRQATQQQSSDSQSGN CCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFKPSVSNRRFLFCFTQKSTYAPKLSVILYPSRSIDTGDIKHYREFFISERVRRIYLDEL CCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IDATSLPISLATVKLIVTSEDTAIVEARKLIARTKSEINLPAKQKEFLELIETIILYKLP HHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC SISKKELEEMFSLSDLRNTRYFQDVFQEGKEEGERSGKLKAVPAMLAAGLTLEQVAQALD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHC LSVEEVRQATQQQSSDSQSGN CCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA