| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is gpmI [H]
Identifier: 17231674
GI number: 17231674
Start: 5030258
End: 5031859
Strand: Reverse
Name: gpmI [H]
Synonym: all4182
Alternate gene names: 17231674
Gene position: 5031859-5030258 (Counterclockwise)
Preceding gene: 17231675
Following gene: 17231673
Centisome position: 78.45
GC content: 47.57
Gene sequence:
>1602_bases ATGACCAAAGCACCTGTTGCTCCTGTGGTGCTAGTCATTTTAGACGGATGGGGCTACTGCGAGGAGACGCGAGGAAATGC TATTGCTGCCGCCAAAACTCCAGTAATGGAAAGCTTATGGACGGCTTACCCGCATACCCTCATCCACACATCAGGGAAAG CCGTAGGATTGCCAGAAGGTCAAATGGGTAACTCGGAAGTTGGTCATTTGAACATTGGTGCTGGGCGAGTCGTGCCACAG GAATTGGTACGAATCTCCGATGCGGTGGAGGATGGTTCTATCCTCAGCAACTCAGCTCTTGTCAAAATTTGCCAGGAAGT TCGCAATCGGAATGGCAAGCTACATTTAGTAGGGCTTTGTTCTGAGGGGGGTGTACACTCGCATATCACCCATCTATTCG GACTACTTGACTTAGCCAAAGAACAGCGAATTTCTGAAGTTTGTATTCATGCCATTACTGATGGTCGTGACACCGCGCCA ACCGATGGTATAAACGCAATCTCAGCCTTAGAAGACTACATCAATCATGTAGGAATCGGGCGCATTGTCACTGTTAGCGG TCGTTACTATGCGATGGATCGCGATCGCCGTTGGGATCGGGTACAACGCGCTTATGATGTAATGACTCAAGACGGTGTAG GTGATGGACGCAAGGCTGTTGATGTCTTGCAAGCATCCTATGCCGAAGGAGTGAATGATGAGTTTATTGTTCCCGTGCGA ATTGCTCCTGGTACTGTCGAGCCAGGAGATGGGGTGATATTCTTTAATTTCCGTCCAGACCGTTCTAGACAACTGACTCA AGCTTTTGTCAGCCCTGAATTTACAGGCTTTGCCAGACAGCAAATCAAACCACTGTCTTTTGTCACATTTACCCAATACG ATTCTGATTTATCAGTATCTGTAGCCTTTGAGCCACAGAACTTAACCAATATTCTGGGTGAAGTCATCGCCAATCAGGGT TTAAATCAGTTTCGTACCGCCGAAACCGAAAAGTATGCCCATGTCACCTATTTCTTCAACGGTGGCTTAGAAGAACCCTT TGCTGGGGAAGACAGGGAACTTGTCAGCAGTCCAATGGTAGCGACTTACGACAAAGCCCCAGCCATGTCAGCAACCGCAG TTACCGATACAGCGATCGCCGCAATTCAAAAAGGTATCTACTCTTTAATTGTCATTAACTATGCCAACCCAGATATGGTA GGGCATACTGGTCAAATAGAACCCACAATAAAGGCCATCGAAACAGTTGATCGCTGTTTAGGTCGTTTGTTAGAAGGTGT AAGCAAAGCCGGGGGAACAACAATTATTACCGCCGATCACGGCAACGCCGAGTATATGCTAGATGAAGCAGGTAATTCTT GGACAGCTCACACAACTAACCCAGTCCCCTTAATTTTAGTGGAAGGCGAAAAAGTTAAAATCCCTGGATATGGTACCAAC GTCGAACTACGTAGCGACGGCAAACTAGCCGACATTGCACCCACAATCCTCGACATTTTACAGCTACCCCAACCACCAGA AATGACAGGGCGATCGCTCCTGCAACCAGCAGAATATGAGGTGGAACTCAGTCGCACCCCTATTCCTGTAGGGCTTAATT AA
Upstream 100 bases:
>100_bases ATTTTTGTCATCAGAAAAGTTAATAAGCAGAAATTCACTTGCAGTGACGGGTAGCAGTGGTATCATTCGGGTATTACAAA AAGTAAAGGGCAATTTTATT
Downstream 100 bases:
>100_bases GCTATGAGAGAACAGTTAACTGTTAACAGTTAACCGTCAACTGTTCTCTCATTAGCAAACCCTTCTTTTTTGAAACTTGT TATAAAAGAGATTGCTACCA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MTKAPVAPVVLVILDGWGYCEETRGNAIAAAKTPVMESLWTAYPHTLIHTSGKAVGLPEGQMGNSEVGHLNIGAGRVVPQ ELVRISDAVEDGSILSNSALVKICQEVRNRNGKLHLVGLCSEGGVHSHITHLFGLLDLAKEQRISEVCIHAITDGRDTAP TDGINAISALEDYINHVGIGRIVTVSGRYYAMDRDRRWDRVQRAYDVMTQDGVGDGRKAVDVLQASYAEGVNDEFIVPVR IAPGTVEPGDGVIFFNFRPDRSRQLTQAFVSPEFTGFARQQIKPLSFVTFTQYDSDLSVSVAFEPQNLTNILGEVIANQG LNQFRTAETEKYAHVTYFFNGGLEEPFAGEDRELVSSPMVATYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMV GHTGQIEPTIKAIETVDRCLGRLLEGVSKAGGTTIITADHGNAEYMLDEAGNSWTAHTTNPVPLILVEGEKVKIPGYGTN VELRSDGKLADIAPTILDILQLPQPPEMTGRSLLQPAEYEVELSRTPIPVGLN
Sequences:
>Translated_533_residues MTKAPVAPVVLVILDGWGYCEETRGNAIAAAKTPVMESLWTAYPHTLIHTSGKAVGLPEGQMGNSEVGHLNIGAGRVVPQ ELVRISDAVEDGSILSNSALVKICQEVRNRNGKLHLVGLCSEGGVHSHITHLFGLLDLAKEQRISEVCIHAITDGRDTAP TDGINAISALEDYINHVGIGRIVTVSGRYYAMDRDRRWDRVQRAYDVMTQDGVGDGRKAVDVLQASYAEGVNDEFIVPVR IAPGTVEPGDGVIFFNFRPDRSRQLTQAFVSPEFTGFARQQIKPLSFVTFTQYDSDLSVSVAFEPQNLTNILGEVIANQG LNQFRTAETEKYAHVTYFFNGGLEEPFAGEDRELVSSPMVATYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMV GHTGQIEPTIKAIETVDRCLGRLLEGVSKAGGTTIITADHGNAEYMLDEAGNSWTAHTTNPVPLILVEGEKVKIPGYGTN VELRSDGKLADIAPTILDILQLPQPPEMTGRSLLQPAEYEVELSRTPIPVGLN >Mature_532_residues TKAPVAPVVLVILDGWGYCEETRGNAIAAAKTPVMESLWTAYPHTLIHTSGKAVGLPEGQMGNSEVGHLNIGAGRVVPQE LVRISDAVEDGSILSNSALVKICQEVRNRNGKLHLVGLCSEGGVHSHITHLFGLLDLAKEQRISEVCIHAITDGRDTAPT DGINAISALEDYINHVGIGRIVTVSGRYYAMDRDRRWDRVQRAYDVMTQDGVGDGRKAVDVLQASYAEGVNDEFIVPVRI APGTVEPGDGVIFFNFRPDRSRQLTQAFVSPEFTGFARQQIKPLSFVTFTQYDSDLSVSVAFEPQNLTNILGEVIANQGL NQFRTAETEKYAHVTYFFNGGLEEPFAGEDRELVSSPMVATYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMVG HTGQIEPTIKAIETVDRCLGRLLEGVSKAGGTTIITADHGNAEYMLDEAGNSWTAHTTNPVPLILVEGEKVKIPGYGTNV ELRSDGKLADIAPTILDILQLPQPPEMTGRSLLQPAEYEVELSRTPIPVGLN
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=48.2490272373541, Blast_Score=498, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17507741, Length=515, Percent_Identity=45.2427184466019, Blast_Score=434, Evalue=1e-122, Organism=Caenorhabditis elegans, GI32564249, Length=515, Percent_Identity=45.2427184466019, Blast_Score=434, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 57678; Mature: 57547
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAPVAPVVLVILDGWGYCEETRGNAIAAAKTPVMESLWTAYPHTLIHTSGKAVGLPEG CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCCCEECCCCC QMGNSEVGHLNIGAGRVVPQELVRISDAVEDGSILSNSALVKICQEVRNRNGKLHLVGLC CCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC SEGGVHSHITHLFGLLDLAKEQRISEVCIHAITDGRDTAPTDGINAISALEDYINHVGIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC RIVTVSGRYYAMDRDRRWDRVQRAYDVMTQDGVGDGRKAVDVLQASYAEGVNDEFIVPVR EEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE IAPGTVEPGDGVIFFNFRPDRSRQLTQAFVSPEFTGFARQQIKPLSFVTFTQYDSDLSVS ECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCEEE VAFEPQNLTNILGEVIANQGLNQFRTAETEKYAHVTYFFNGGLEEPFAGEDRELVSSPMV EEECCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCE ATYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMVGHTGQIEPTIKAIETVDRCL EEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GRLLEGVSKAGGTTIITADHGNAEYMLDEAGNSWTAHTTNPVPLILVEGEKVKIPGYGTN HHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEECCCCEEEEEECCCEEECCCCCCC VELRSDGKLADIAPTILDILQLPQPPEMTGRSLLQPAEYEVELSRTPIPVGLN EEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure TKAPVAPVVLVILDGWGYCEETRGNAIAAAKTPVMESLWTAYPHTLIHTSGKAVGLPEG CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCCCEECCCCC QMGNSEVGHLNIGAGRVVPQELVRISDAVEDGSILSNSALVKICQEVRNRNGKLHLVGLC CCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC SEGGVHSHITHLFGLLDLAKEQRISEVCIHAITDGRDTAPTDGINAISALEDYINHVGIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC RIVTVSGRYYAMDRDRRWDRVQRAYDVMTQDGVGDGRKAVDVLQASYAEGVNDEFIVPVR EEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE IAPGTVEPGDGVIFFNFRPDRSRQLTQAFVSPEFTGFARQQIKPLSFVTFTQYDSDLSVS ECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCEEE VAFEPQNLTNILGEVIANQGLNQFRTAETEKYAHVTYFFNGGLEEPFAGEDRELVSSPMV EEECCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCE ATYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMVGHTGQIEPTIKAIETVDRCL EEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GRLLEGVSKAGGTTIITADHGNAEYMLDEAGNSWTAHTTNPVPLILVEGEKVKIPGYGTN HHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEECCCCEEEEEECCCEEECCCCCCC VELRSDGKLADIAPTILDILQLPQPPEMTGRSLLQPAEYEVELSRTPIPVGLN EEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA