| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231672
Identifier: 17231672
GI number: 17231672
Start: 5029155
End: 5029904
Strand: Reverse
Name: 17231672
Synonym: all4180
Alternate gene names: NA
Gene position: 5029904-5029155 (Counterclockwise)
Preceding gene: 17231673
Following gene: 17231671
Centisome position: 78.42
GC content: 43.87
Gene sequence:
>750_bases ATGGGGAATAAAATTCAACACCCAAAACCTAACACCCTCAAGAATTTTCGATCAAAGCACTTACTAGCAGCCCTCGCCTT ATTTATAGGTGCAGGGCTGCTAATCATTTTCACTAATCTCCAGTTAAGTAATGCTTTAACAACAAAGCCCTCTTTCTCCC CACCAAAAGCCCATCCTCTACCTTCCACACTTGCACAATGGCAAGACAGCACCAATAGCGGTGATTACTTTTCTCAAGTT GCAACAACTGATGTCGGTTATTTAGTGTGGTCACAATTTCCCGTGCGAGTTCATATCAAACAACCACAACTAATTAACGC ACAACAGGCGCAAATATGGGTTGATAGTGTTTTCACAACTGTGCAGGAATGGGCTAATTATTTGCCTTTGGTAATTGTAG AACAAGCTGAAGTTGCCGATATTACGATTGAGCGCAAAACCCCACCTTTACAAATAGGTAAAGATAAAATCCCCCGTGCG CGTTCTGCTCTCACCCGCTACGAATTATACACAAAGAATAATGTCTTATCACACCGCTTTACTATCCTATTAAATCCTAC CCAAACAGGTGAGTATCTTCTGGCAGCCGCCCGCCACGAAATCGGTCACGCCCTGGGAATTTGGGGGCATAGTTCCCTAC CAAGCGATGCTTTATATTTTTCCCAAGTCCGCAACCCACCGCCAATTTCTGCCAGAGATGTCAATACTTTAAAGCGGGTT TATGAACAGCCAACTAGTTTGGGTTGGTAG
Upstream 100 bases:
>100_bases TAAACCGTGTTACCTGGGCATTGACAGTCATTTTCCTCGGTTTAACAGTAGTTTTAAGCGCAGGTTGGCTACCTAAATAA CATTAAAGGGAGATAGGTAT
Downstream 100 bases:
>100_bases TTATTTCAGATTGAGTAATTAAGATTGGGAATCTAATAATTATTCTTTCACTAAATCAGAATCAAACATTGTATATTTTA TATAAATGCTTCGCATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Protease; Peptidase
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MGNKIQHPKPNTLKNFRSKHLLAALALFIGAGLLIIFTNLQLSNALTTKPSFSPPKAHPLPSTLAQWQDSTNSGDYFSQV ATTDVGYLVWSQFPVRVHIKQPQLINAQQAQIWVDSVFTTVQEWANYLPLVIVEQAEVADITIERKTPPLQIGKDKIPRA RSALTRYELYTKNNVLSHRFTILLNPTQTGEYLLAAARHEIGHALGIWGHSSLPSDALYFSQVRNPPPISARDVNTLKRV YEQPTSLGW
Sequences:
>Translated_249_residues MGNKIQHPKPNTLKNFRSKHLLAALALFIGAGLLIIFTNLQLSNALTTKPSFSPPKAHPLPSTLAQWQDSTNSGDYFSQV ATTDVGYLVWSQFPVRVHIKQPQLINAQQAQIWVDSVFTTVQEWANYLPLVIVEQAEVADITIERKTPPLQIGKDKIPRA RSALTRYELYTKNNVLSHRFTILLNPTQTGEYLLAAARHEIGHALGIWGHSSLPSDALYFSQVRNPPPISARDVNTLKRV YEQPTSLGW >Mature_248_residues GNKIQHPKPNTLKNFRSKHLLAALALFIGAGLLIIFTNLQLSNALTTKPSFSPPKAHPLPSTLAQWQDSTNSGDYFSQVA TTDVGYLVWSQFPVRVHIKQPQLINAQQAQIWVDSVFTTVQEWANYLPLVIVEQAEVADITIERKTPPLQIGKDKIPRAR SALTRYELYTKNNVLSHRFTILLNPTQTGEYLLAAARHEIGHALGIWGHSSLPSDALYFSQVRNPPPISARDVNTLKRVY EQPTSLGW
Specific function: Unknown
COG id: COG5549
COG function: function code O; Predicted Zn-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27898; Mature: 27767
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKIQHPKPNTLKNFRSKHLLAALALFIGAGLLIIFTNLQLSNALTTKPSFSPPKAHPL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCCCCCCCC PSTLAQWQDSTNSGDYFSQVATTDVGYLVWSQFPVRVHIKQPQLINAQQAQIWVDSVFTT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH VQEWANYLPLVIVEQAEVADITIERKTPPLQIGKDKIPRARSALTRYELYTKNNVLSHRF HHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECEEE TILLNPTQTGEYLLAAARHEIGHALGIWGHSSLPSDALYFSQVRNPPPISARDVNTLKRV EEEECCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHH YEQPTSLGW HHCCCCCCC >Mature Secondary Structure GNKIQHPKPNTLKNFRSKHLLAALALFIGAGLLIIFTNLQLSNALTTKPSFSPPKAHPL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCCCCCCCC PSTLAQWQDSTNSGDYFSQVATTDVGYLVWSQFPVRVHIKQPQLINAQQAQIWVDSVFTT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH VQEWANYLPLVIVEQAEVADITIERKTPPLQIGKDKIPRARSALTRYELYTKNNVLSHRF HHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECEEE TILLNPTQTGEYLLAAARHEIGHALGIWGHSSLPSDALYFSQVRNPPPISARDVNTLKRV EEEECCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHH YEQPTSLGW HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA