| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231663
Identifier: 17231663
GI number: 17231663
Start: 5018096
End: 5019049
Strand: Direct
Name: 17231663
Synonym: alr4171
Alternate gene names: NA
Gene position: 5018096-5019049 (Clockwise)
Preceding gene: 17231662
Following gene: 17231664
Centisome position: 78.24
GC content: 46.44
Gene sequence:
>954_bases ATGACAATGGGAAAGCGCACTCAAGCCCCAGCACTGGAAGTCCGGTTGCTGCGTGAAGGTATTATCGAATCGAAGCATAT AGTCCAAGCTGTTGTTTGCGATGAACGAGGACGAGTGCTTAGTGTTGCCGGTAACTCGGAAACAGCTACATTTGTCCGTT CAGCACTCAAACCATTTCAGGCACTTGCAGTCACTACTACAGGGACACTGGAACGCTACGATTTGAGCGATCGCGACTTA GCAATTATTACCAGTTCCCACAAGGGTACAATCGAGCAAGTAAGGCAGGCATTTAATATCCTGTGGCGTGCTGATCTTGA CCCTTCCGTACTCCAGTGTCCAATTCCTCAAGGCAAACGTAGCCCTCTTGAATATAATTGCTCTGGTAAGCACGCAGGAA TGTTGGCTATTTGTCAACAACGCCATTGGCCTTTAAATAACTACATGGATCGCAAACACCCAGTACAGCAGTTAGTTCTG GCTAAGGTTGCAGAGTTATTGCGAATGCCAGCCGCAGAATTTATTAGCGCCCACGATGATTGTGGTGTACCTACTTATCT ACTGCAATTAGGTCAAATTTCTTCTTTATATGCGCTTCTAGCTGCTAGTAACAACCTAGATATGGAACGCATTGTCCGAG CCATGACTCATCACCCGTCAATGGTAGCAGGAGAGAGGGAATTTGATACGGAACTAATGCGCTTAACTCCTGGGGAATTA GTAAGTAAGTCTGGTGCAGAAGGCGTACAGTGCATTGGCAGACTTGGTGAAGGGATGGGATTGACGATTAAGGTCATGGA CGGCGCTAAACGGGCAAAATATGCAGTTGCTATTCACCTCCTCCAGCAGATGGGTTGGATTACTCCTAGCGTTGCTGAAA GCTTGGCAGAAAAATTTATGAACCCAGGCAAATACACGCGTTTAGAGGTTGTTGGAGAATTATCGCTTTTATAG
Upstream 100 bases:
>100_bases TAGTTTGGCATTTGTTTTAAATCGTCATGAGTCAGTAGTCAGTAAGCAACTGACGACTTACAACTGGCAACTTACAAAAA AAAGAGATAAATATTAACCC
Downstream 100 bases:
>100_bases TTGCCAAACTTTTGAGTTTGGGTTATACTTGAAAAGTCAAGAAAAACGACGCGGGATAGAGCAGCCTGGTAGCTCGTCGG GCTCATAACCCGAAGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTMGKRTQAPALEVRLLREGIIESKHIVQAVVCDERGRVLSVAGNSETATFVRSALKPFQALAVTTTGTLERYDLSDRDL AIITSSHKGTIEQVRQAFNILWRADLDPSVLQCPIPQGKRSPLEYNCSGKHAGMLAICQQRHWPLNNYMDRKHPVQQLVL AKVAELLRMPAAEFISAHDDCGVPTYLLQLGQISSLYALLAASNNLDMERIVRAMTHHPSMVAGEREFDTELMRLTPGEL VSKSGAEGVQCIGRLGEGMGLTIKVMDGAKRAKYAVAIHLLQQMGWITPSVAESLAEKFMNPGKYTRLEVVGELSLL
Sequences:
>Translated_317_residues MTMGKRTQAPALEVRLLREGIIESKHIVQAVVCDERGRVLSVAGNSETATFVRSALKPFQALAVTTTGTLERYDLSDRDL AIITSSHKGTIEQVRQAFNILWRADLDPSVLQCPIPQGKRSPLEYNCSGKHAGMLAICQQRHWPLNNYMDRKHPVQQLVL AKVAELLRMPAAEFISAHDDCGVPTYLLQLGQISSLYALLAASNNLDMERIVRAMTHHPSMVAGEREFDTELMRLTPGEL VSKSGAEGVQCIGRLGEGMGLTIKVMDGAKRAKYAVAIHLLQQMGWITPSVAESLAEKFMNPGKYTRLEVVGELSLL >Mature_316_residues TMGKRTQAPALEVRLLREGIIESKHIVQAVVCDERGRVLSVAGNSETATFVRSALKPFQALAVTTTGTLERYDLSDRDLA IITSSHKGTIEQVRQAFNILWRADLDPSVLQCPIPQGKRSPLEYNCSGKHAGMLAICQQRHWPLNNYMDRKHPVQQLVLA KVAELLRMPAAEFISAHDDCGVPTYLLQLGQISSLYALLAASNNLDMERIVRAMTHHPSMVAGEREFDTELMRLTPGELV SKSGAEGVQCIGRLGEGMGLTIKVMDGAKRAKYAVAIHLLQQMGWITPSVAESLAEKFMNPGKYTRLEVVGELSLL
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34946; Mature: 34815
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMGKRTQAPALEVRLLREGIIESKHIVQAVVCDERGRVLSVAGNSETATFVRSALKPFQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH ALAVTTTGTLERYDLSDRDLAIITSSHKGTIEQVRQAFNILWRADLDPSVLQCPIPQGKR HEEEEECCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC SPLEYNCSGKHAGMLAICQQRHWPLNNYMDRKHPVQQLVLAKVAELLRMPAAEFISAHDD CCCEECCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC CGVPTYLLQLGQISSLYALLAASNNLDMERIVRAMTHHPSMVAGEREFDTELMRLTPGEL CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHCCCHHH VSKSGAEGVQCIGRLGEGMGLTIKVMDGAKRAKYAVAIHLLQQMGWITPSVAESLAEKFM HHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC NPGKYTRLEVVGELSLL CCCCCCCEEEEECCCCC >Mature Secondary Structure TMGKRTQAPALEVRLLREGIIESKHIVQAVVCDERGRVLSVAGNSETATFVRSALKPFQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH ALAVTTTGTLERYDLSDRDLAIITSSHKGTIEQVRQAFNILWRADLDPSVLQCPIPQGKR HEEEEECCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC SPLEYNCSGKHAGMLAICQQRHWPLNNYMDRKHPVQQLVLAKVAELLRMPAAEFISAHDD CCCEECCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC CGVPTYLLQLGQISSLYALLAASNNLDMERIVRAMTHHPSMVAGEREFDTELMRLTPGEL CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHCCCHHH VSKSGAEGVQCIGRLGEGMGLTIKVMDGAKRAKYAVAIHLLQQMGWITPSVAESLAEKFM HHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC NPGKYTRLEVVGELSLL CCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA