Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231655

Identifier: 17231655

GI number: 17231655

Start: 5009482

End: 5010081

Strand: Reverse

Name: 17231655

Synonym: all4163

Alternate gene names: NA

Gene position: 5010081-5009482 (Counterclockwise)

Preceding gene: 17231669

Following gene: 17231654

Centisome position: 78.11

GC content: 41.33

Gene sequence:

>600_bases
GTGCTGGTGACAAATGCTCCACCATTTTTTCGAGAGGGTTTTATGGGAGCTAACCTCAAACAAATTGCTAATTACTTAGA
CAAACTAGGTTGGGACTACCGTCTTGAGGAAGAAGAAGACCGCATTATCACAGGTGTGGACGCTGACAACCTAGAAGATT
TTTTAATAGTTGTCCAACTAGACGAAGAAGGAAAATTTTTTCGAGTATTTGCGCCCCAAGTTCTGGCTGGAGTACAAGAC
CACCCTTATAAGGGAGCTATCTTACAGACGATGCTAGCAATTTCTTGGGAAACGAAAATGCTGCAATGGGAATATGACCC
ATCAGACGGTGAAATTAGAGCAATTATTGAGTTTCCCTTGGAAGACTCGATTCTGACCGAAAGGCAATTTCATCGGTGTC
TGAGCGGATTAATTCAGATTGTGGACAATATAGCTATACCCCGATTGATAGAAGTGATGAAAACAGGTCATGATCCTGGG
AATATAGAACTTGGTGAAAGATTATTATTGAGTATTCAGGAAGAAGCTCCTGGATTATTAGAAATACTAGAAAAAGCAAT
GGAAGCCCGAAAGAAGCGGGGTAGTTTTCCTACAGAGTGA

Upstream 100 bases:

>100_bases
CCAACAGACTTATTTAGTTTACTAAGGCTTTCTGTACCCTTACGAAAACTAGAGAAGCAATTATGTCAATTAATCCAGAT
GCCCCTAAAAGGTTACACTA

Downstream 100 bases:

>100_bases
GACGCATCATCACTTAAATAGTTATCATTAACTGCATACACCACGATGAATGGAAAGTAGCACTGAGGATAGAAGCCAGA
TGTTCAAATTTTTTACCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MLVTNAPPFFREGFMGANLKQIANYLDKLGWDYRLEEEEDRIITGVDADNLEDFLIVVQLDEEGKFFRVFAPQVLAGVQD
HPYKGAILQTMLAISWETKMLQWEYDPSDGEIRAIIEFPLEDSILTERQFHRCLSGLIQIVDNIAIPRLIEVMKTGHDPG
NIELGERLLLSIQEEAPGLLEILEKAMEARKKRGSFPTE

Sequences:

>Translated_199_residues
MLVTNAPPFFREGFMGANLKQIANYLDKLGWDYRLEEEEDRIITGVDADNLEDFLIVVQLDEEGKFFRVFAPQVLAGVQD
HPYKGAILQTMLAISWETKMLQWEYDPSDGEIRAIIEFPLEDSILTERQFHRCLSGLIQIVDNIAIPRLIEVMKTGHDPG
NIELGERLLLSIQEEAPGLLEILEKAMEARKKRGSFPTE
>Mature_199_residues
MLVTNAPPFFREGFMGANLKQIANYLDKLGWDYRLEEEEDRIITGVDADNLEDFLIVVQLDEEGKFFRVFAPQVLAGVQD
HPYKGAILQTMLAISWETKMLQWEYDPSDGEIRAIIEFPLEDSILTERQFHRCLSGLIQIVDNIAIPRLIEVMKTGHDPG
NIELGERLLLSIQEEAPGLLEILEKAMEARKKRGSFPTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22747; Mature: 22747

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTNAPPFFREGFMGANLKQIANYLDKLGWDYRLEEEEDRIITGVDADNLEDFLIVVQL
CCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCEEEEEEEE
DEEGKFFRVFAPQVLAGVQDHPYKGAILQTMLAISWETKMLQWEYDPSDGEIRAIIEFPL
CCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCC
EDSILTERQFHRCLSGLIQIVDNIAIPRLIEVMKTGHDPGNIELGERLLLSIQEEAPGLL
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
EILEKAMEARKKRGSFPTE
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLVTNAPPFFREGFMGANLKQIANYLDKLGWDYRLEEEEDRIITGVDADNLEDFLIVVQL
CCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCEEEEEEEE
DEEGKFFRVFAPQVLAGVQDHPYKGAILQTMLAISWETKMLQWEYDPSDGEIRAIIEFPL
CCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCC
EDSILTERQFHRCLSGLIQIVDNIAIPRLIEVMKTGHDPGNIELGERLLLSIQEEAPGLL
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
EILEKAMEARKKRGSFPTE
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA