| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231647
Identifier: 17231647
GI number: 17231647
Start: 4998359
End: 4999195
Strand: Reverse
Name: 17231647
Synonym: all4155
Alternate gene names: NA
Gene position: 4999195-4998359 (Counterclockwise)
Preceding gene: 17231651
Following gene: 17231644
Centisome position: 77.94
GC content: 38.47
Gene sequence:
>837_bases ATGATGACAACTTACACTTTACAAGCGAGCCGGGAATGGTGGTCACAAAGATGGCTCGATTTACTAGATTCTTATCGCTT CAAAAAACGTTTAGAACGAGCGCGGATATATTCTCGTCAAGGTAATGTTTTGAGTATCGAGTTTAAAGGTGCAAAAGTAT TAGCTAGAGTCCAGGGTAGTGAAGAGGAGCCTTATAAAGTATCCCTATCACTTGATCCATTTAGTGATGAGCAGTGGGGT TATGTGATTGAAACTATGTCCCAAAAAGCTGTTTTCGCTGCCAAGCTATTAGCAGGAGAAATGCCCCAAAATATTGAGGA AGTATTTACAAGTAATGGGCTTTCATTATTTCCTTTCACCTTGTCTGATGTCCATAGTAAATGCTCCTGCCCTGATAAAG CCAACCCCTGTAAACACGTTGGTGCAGTCTACTATCAACTAGGAGACAGATTTAGCGAAGATCCATTTGTCTTGTTTCAG TTACGTGGACGTAATAAAGAAAAAATTATCCGCGATTTACGACAATTACGTAATGCAAAAATAGAAACTAAAATAACAGC AAAATCTGAGACTCAACAGCAAATTCCTCGGACTCAATCTAATATTAAATTAGATTCTTGCTGGCAATATAATGAACCAC TCGAATCATCATTAGTTGTGATTGCTCCCTCAACTGGTGAAACAGTGTTAGATGTATTGGGAGTAGTTCCTCTAGTAAAG GATGAAGAAAATTCAACAAATTTAAACCCTAGTGATGTAGTCATGAAATATTTAGCAACCCTGTATAAAGAAGTAGGGCA GAAGGCTATGTTAACAGCGATGAATGTGGGCGGTTAA
Upstream 100 bases:
>100_bases CCTGAAATAGCAGTGTGATGGTAACTTGAAGCAGACTAAGCACTTGGTTAAGGCGCAAGGCGGATGTAATACCCTATAGA AAGCAAACTACATATATTTA
Downstream 100 bases:
>100_bases TAATAAGGCGTAATTTGTAATTAAGAGGTTATTTATAAAGTAGAAATCAAATTTTTGTAGTGTTAGGTGCAGATTTCGAT ATGATTAGTCACAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MMTTYTLQASREWWSQRWLDLLDSYRFKKRLERARIYSRQGNVLSIEFKGAKVLARVQGSEEEPYKVSLSLDPFSDEQWG YVIETMSQKAVFAAKLLAGEMPQNIEEVFTSNGLSLFPFTLSDVHSKCSCPDKANPCKHVGAVYYQLGDRFSEDPFVLFQ LRGRNKEKIIRDLRQLRNAKIETKITAKSETQQQIPRTQSNIKLDSCWQYNEPLESSLVVIAPSTGETVLDVLGVVPLVK DEENSTNLNPSDVVMKYLATLYKEVGQKAMLTAMNVGG
Sequences:
>Translated_278_residues MMTTYTLQASREWWSQRWLDLLDSYRFKKRLERARIYSRQGNVLSIEFKGAKVLARVQGSEEEPYKVSLSLDPFSDEQWG YVIETMSQKAVFAAKLLAGEMPQNIEEVFTSNGLSLFPFTLSDVHSKCSCPDKANPCKHVGAVYYQLGDRFSEDPFVLFQ LRGRNKEKIIRDLRQLRNAKIETKITAKSETQQQIPRTQSNIKLDSCWQYNEPLESSLVVIAPSTGETVLDVLGVVPLVK DEENSTNLNPSDVVMKYLATLYKEVGQKAMLTAMNVGG >Mature_278_residues MMTTYTLQASREWWSQRWLDLLDSYRFKKRLERARIYSRQGNVLSIEFKGAKVLARVQGSEEEPYKVSLSLDPFSDEQWG YVIETMSQKAVFAAKLLAGEMPQNIEEVFTSNGLSLFPFTLSDVHSKCSCPDKANPCKHVGAVYYQLGDRFSEDPFVLFQ LRGRNKEKIIRDLRQLRNAKIETKITAKSETQQQIPRTQSNIKLDSCWQYNEPLESSLVVIAPSTGETVLDVLGVVPLVK DEENSTNLNPSDVVMKYLATLYKEVGQKAMLTAMNVGG
Specific function: Unknown
COG id: COG4279
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31606; Mature: 31606
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTYTLQASREWWSQRWLDLLDSYRFKKRLERARIYSRQGNVLSIEFKGAKVLARVQGS CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCC EEEPYKVSLSLDPFSDEQWGYVIETMSQKAVFAAKLLAGEMPQNIEEVFTSNGLSLFPFT CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEE LSDVHSKCSCPDKANPCKHVGAVYYQLGDRFSEDPFVLFQLRGRNKEKIIRDLRQLRNAK HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC IETKITAKSETQQQIPRTQSNIKLDSCWQYNEPLESSLVVIAPSTGETVLDVLGVVPLVK EEEEEECCCHHHHHCCCCHHCCEEHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEE DEENSTNLNPSDVVMKYLATLYKEVGQKAMLTAMNVGG CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCC >Mature Secondary Structure MMTTYTLQASREWWSQRWLDLLDSYRFKKRLERARIYSRQGNVLSIEFKGAKVLARVQGS CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCC EEEPYKVSLSLDPFSDEQWGYVIETMSQKAVFAAKLLAGEMPQNIEEVFTSNGLSLFPFT CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEE LSDVHSKCSCPDKANPCKHVGAVYYQLGDRFSEDPFVLFQLRGRNKEKIIRDLRQLRNAK HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC IETKITAKSETQQQIPRTQSNIKLDSCWQYNEPLESSLVVIAPSTGETVLDVLGVVPLVK EEEEEECCCHHHHHCCCCHHCCEEHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEE DEENSTNLNPSDVVMKYLATLYKEVGQKAMLTAMNVGG CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA