| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231553
Identifier: 17231553
GI number: 17231553
Start: 4889323
End: 4890264
Strand: Direct
Name: 17231553
Synonym: alr4061
Alternate gene names: NA
Gene position: 4889323-4890264 (Clockwise)
Preceding gene: 17231552
Following gene: 17231554
Centisome position: 76.23
GC content: 46.6
Gene sequence:
>942_bases ATGGCTGCTCTGAAAAAATTTCTACAGCTTAATAGTTGGTTGGCGATCGCCGTTTTAGCCTGGGGTGTTGGTTACTTATA CAATGCTCGTTATGGGGGCGAACTCAGTTGGCTACGCATCATGTATGAGCAGAAAAAAGCGATCGCAAGTGAAGTCCAAG CTCCCCAACGGATTTTGATTGTCGGTGGTTCTGGGGCGCACTACACCGTAGACGCAGGATTGATGCAGCAACAATTAGGC ATCCCGGCTCTCAACATGGCCACAGATGGCCCAGTCGGCTTAAATGTCATCCTGCCCAGTGTCGCCGATAGCATTAAAAA AGGTGATATTGTCGTACTAATACCGGAGTATCTCATCTTAAATGATAAAGATGGCTTTGGCGATCGCTCTGGTCAGTTTA GTGTAGCCATTGGTAAACCCGGACTTGGGGGTGTTCCTGCCAAACAACTAGCCCAAGATATCATGTTGCTTGGTGTTCCT ACCTTGCGCGCAGTTACCAAGTCATCTGTAGAATTAGTAGAAAAAGGCCGCTTCACTGGTTATTACTCCGATCCCATCAC TGCGAATGGAGACCCTACAGTGATGAAACAGCGCCTTAAGTCAGCTTGGTGGCAACTAAAAATCCAAGAGCCAGTTTCTC CCCAGGCTTTACGACGTATTCGCCAGTTTAAAAAAGAAGTTGAAGCTAAAGGCGCAACTTTAGTTCTCGGACTTTCGTGG ATTTACGCCAGTACTGATACTAAAACCATCGGTAATATCAGCAAAACTGCTGAGAAACTAAGTGAAATTGCCCCTCTACT CTACGACAAACAAACCTTGAACGTAAAAACCGATTCGAGTCTGTTTGCCGACACCCACTATCACCTCAATCCTCCAGGTC GCCGCACCCGCACCACCGAGTTAGTAGAACAACTCAAGACCCTCAATATTATTCGTAACTAA
Upstream 100 bases:
>100_bases TACTCTCTCCCTGGGTTTCGCGGGTGCTATTAGCGTTAACCGTCTTACTAGCTGCGAATACACCATCGCCCTTTATCTAC TTTGAGTTCTAAGGAATTAT
Downstream 100 bases:
>100_bases TCCGCAGGTACAGGGCAAGGGGCAGAGAGAGGAGCAGAGGAAAAATATTGACAACTAACAACTGACAACTGACTCTTACC TCCACACTTTTAATTATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAALKKFLQLNSWLAIAVLAWGVGYLYNARYGGELSWLRIMYEQKKAIASEVQAPQRILIVGGSGAHYTVDAGLMQQQLG IPALNMATDGPVGLNVILPSVADSIKKGDIVVLIPEYLILNDKDGFGDRSGQFSVAIGKPGLGGVPAKQLAQDIMLLGVP TLRAVTKSSVELVEKGRFTGYYSDPITANGDPTVMKQRLKSAWWQLKIQEPVSPQALRRIRQFKKEVEAKGATLVLGLSW IYASTDTKTIGNISKTAEKLSEIAPLLYDKQTLNVKTDSSLFADTHYHLNPPGRRTRTTELVEQLKTLNIIRN
Sequences:
>Translated_313_residues MAALKKFLQLNSWLAIAVLAWGVGYLYNARYGGELSWLRIMYEQKKAIASEVQAPQRILIVGGSGAHYTVDAGLMQQQLG IPALNMATDGPVGLNVILPSVADSIKKGDIVVLIPEYLILNDKDGFGDRSGQFSVAIGKPGLGGVPAKQLAQDIMLLGVP TLRAVTKSSVELVEKGRFTGYYSDPITANGDPTVMKQRLKSAWWQLKIQEPVSPQALRRIRQFKKEVEAKGATLVLGLSW IYASTDTKTIGNISKTAEKLSEIAPLLYDKQTLNVKTDSSLFADTHYHLNPPGRRTRTTELVEQLKTLNIIRN >Mature_312_residues AALKKFLQLNSWLAIAVLAWGVGYLYNARYGGELSWLRIMYEQKKAIASEVQAPQRILIVGGSGAHYTVDAGLMQQQLGI PALNMATDGPVGLNVILPSVADSIKKGDIVVLIPEYLILNDKDGFGDRSGQFSVAIGKPGLGGVPAKQLAQDIMLLGVPT LRAVTKSSVELVEKGRFTGYYSDPITANGDPTVMKQRLKSAWWQLKIQEPVSPQALRRIRQFKKEVEAKGATLVLGLSWI YASTDTKTIGNISKTAEKLSEIAPLLYDKQTLNVKTDSSLFADTHYHLNPPGRRTRTTELVEQLKTLNIIRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34332; Mature: 34201
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALKKFLQLNSWLAIAVLAWGVGYLYNARYGGELSWLRIMYEQKKAIASEVQAPQRILI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE VGGSGAHYTVDAGLMQQQLGIPALNMATDGPVGLNVILPSVADSIKKGDIVVLIPEYLIL EECCCCEEEECHHHHHHHHCCCEEECCCCCCCCCEEEEHHHHHHHCCCCEEEECCCEEEE NDKDGFGDRSGQFSVAIGKPGLGGVPAKQLAQDIMLLGVPTLRAVTKSSVELVEKGRFTG ECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE YYSDPITANGDPTVMKQRLKSAWWQLKIQEPVSPQALRRIRQFKKEVEAKGATLVLGLSW EECCCCCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE IYASTDTKTIGNISKTAEKLSEIAPLLYDKQTLNVKTDSSLFADTHYHLNPPGRRTRTTE EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEECEECCCCEEECCCEEECCCCCCCHHHH LVEQLKTLNIIRN HHHHHHHHHHHCC >Mature Secondary Structure AALKKFLQLNSWLAIAVLAWGVGYLYNARYGGELSWLRIMYEQKKAIASEVQAPQRILI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE VGGSGAHYTVDAGLMQQQLGIPALNMATDGPVGLNVILPSVADSIKKGDIVVLIPEYLIL EECCCCEEEECHHHHHHHHCCCEEECCCCCCCCCEEEEHHHHHHHCCCCEEEECCCEEEE NDKDGFGDRSGQFSVAIGKPGLGGVPAKQLAQDIMLLGVPTLRAVTKSSVELVEKGRFTG ECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE YYSDPITANGDPTVMKQRLKSAWWQLKIQEPVSPQALRRIRQFKKEVEAKGATLVLGLSW EECCCCCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE IYASTDTKTIGNISKTAEKLSEIAPLLYDKQTLNVKTDSSLFADTHYHLNPPGRRTRTTE EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEECEECCCCEEECCCEEECCCCCCCHHHH LVEQLKTLNIIRN HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA